Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1516 ATGGCTCAGGTGTCTTCCGCAAATGGAACCCACGAGGCTGTTCTGAACGTCAATGAAAATTCCAATGAAGATTCCGGAATATCCTTCTCCGTCCCTTTCTTGCAGAAGTTGGTGGCAGAATTTGCGGGAACATACTTTCTGATATTCGCCGGCCAAGCGGCGGTGGTGGTGGACAAGGGCTACGGCCACACTATAACGGGTCCAGGGATTTCTATAGTTTGGGGACTTGTCGTTATGGTTCTTGTTTATTCCGTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCTGTCACTTTGGCTTTTGCGTCTACCAAACGTTTTCCCCTCAAACAGGTACCAGCTTATGTGTCAGTTCAGATTCTGGCATCGACTCTTGCGAGTGGGACTCTGAGACTTATATTTCAAGGAAGCAGAGACAACTTCGCAGGAACATTAGTAACTGGGACGTATTTACAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACCTCATGTTTGTCATTTCTGGTGTGGCTACAGATAACAGAGCGATTGGTGAGCTGGCTGGTCTTGCGATAGGGGCAACCGTGTTACTTAATGTCATGTTTGCTGGGCCGGTGACTGGAGCGTCGATGAACCCGGCGAGAAGCTTAGGACCGGCGATTGCGTGGCACAAGTATGATGGAATATGGGTTTACATGCTAGCTCCGGTCGCCGGAGCAGTGGCGGGGGCATGGGTGTATAACGTCATAAGGTACACCAACAAGCCATTAAGGGAGATCACAAAGAGTGCTTCTTTCCTCAAAGCTTCAAAGAATTGTGGTTCCGCGTAG 813 0.4883 MAQVSSANGTHEAVLNVNENSNEDSGISFSVPFLQKLVAEFAGTYFLIFAGQAAVVVDKGYGHTITGPGISIVWGLVVMVLVYSVGHISGAHFNPAVTLAFASTKRFPLKQVPAYVSVQILASTLASGTLRLIFQGSRDNFAGTLVTGTYLQGFVVEFIITFYLMFVISGVATDNRAIGELAGLAIGATVLLNVMFAGPVTGASMNPARSLGPAIAWHKYDGIWVYMLAPVAGAVAGAWVYNVIRYTNKPLREITKSASFLKASKNCGSA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1516 270 Gene3D Glycerol uptake facilitator protein. 5 256 IPR023271 -
Acco03g1516 270 SUPERFAMILY Aquaporin-like 29 255 IPR023271 -
Acco03g1516 270 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 NCBIfam MIP family channel protein 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1516 270 PANTHER AQUAPORIN NIP2-1 20 262 IPR034294 -
Acco03g1516 270 ProSitePatterns MIP family signature. 92 100 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1516 Acco-ChrAcco03 35666607 35669059 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1516 31 263 Major Intrinsic Protein MIP AT5G37810 59.657 7.60e-98 286