Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1513 ATGGCTGAGGCTTCTGCAATCAATGGAACTCGTGAGGTTGTTCTGAATGTCAAAGGCAAATACAATACTGATGAAGACGCCTGCGTCTCCGTCATCATCCCTTTCTTGCAGAAGTTGGTGGCGGAGTTCGTGGGGACGTTTTTTCTGATGTTTGCCGGAGAAGCGTCAGAGGTGGTGGACAAGGGGTACGGTAACAAAATAACGCTTCCGGGGATTGCCGTAGTTTGGGGTCTTACCGTTTTGGTTCTTGTCTACGCCGTCAGTCACATCTCCGGCGCCCATTTTAATCCGGCCGTCACCCTCGCTTTTGCTTCCACCGGACGATTCCCCCTCATACAGGTACCAGGTTATATATCAGTACAGCTTCTGGCGTCCATTCTTGCGAGTGGGACACTAAGGCTTATTTTTGAAGGAAGCCATGACCGATTCTCAGGAACAGTATTATCAGGGACGCATCTTCAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACATCATGCTTGTTAAGTATTCTACCAGTGGTTTGTCGTCAGATAACAGGGAGATGAGTCAGGTGGCTGGTCTGGCAGTAGGGTCAACCATGTTGCTCAATGTGATGTTTGCCGGGCAGGTGACCGGAGCATCAATGAACCCAGCGAGAACCTTAGGGCCGGCGATAGTTTGGCATAAATATAAAGGAATATGGGTGTATATGACAGCGCCGGTGGCCGGAGCAGTGGCGGGGGCATGGGTGTATAACATCATGGTTCATAAAAAAAAGCCAATACAAGATATCACAAAGAGTAGTGCTTTCATCGAAGCTTCGGACCTTTATGATTCCTCGAAGTGA 831 0.4874 MAEASAINGTREVVLNVKGKYNTDEDACVSVIIPFLQKLVAEFVGTFFLMFAGEASEVVDKGYGNKITLPGIAVVWGLTVLVLVYAVSHISGAHFNPAVTLAFASTGRFPLIQVPGYISVQLLASILASGTLRLIFEGSHDRFSGTVLSGTHLQGFVVEFIITFYIMLVKYSTSGLSSDNREMSQVAGLAVGSTMLLNVMFAGQVTGASMNPARTLGPAIVWHKYKGIWVYMTAPVAGAVAGAWVYNIMVHKKKPIQDITKSSAFIEASDLYDSSK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1513 276 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Acco03g1513 276 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 PRINTS Major intrinsic protein family signature 192 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 PRINTS Major intrinsic protein family signature 229 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 SUPERFAMILY Aquaporin-like 31 256 IPR023271 -
Acco03g1513 276 Gene3D Glycerol uptake facilitator protein. 10 261 IPR023271 -
Acco03g1513 276 Pfam Major intrinsic protein 34 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 NCBIfam MIP family channel protein 41 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 CDD MIP 37 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1513 276 PANTHER AQUAPORIN NIP2-1 28 263 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1513 Acco-ChrAcco03 35601501 35605800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1513 16 275 Major Intrinsic Protein MIP AT5G37820 48.473 3.53e-80 243