Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1495 ATGATCGAAACGGTTCGCCTCGCTTCCTCTCCTTTTCTTCTGATTCAGCTTTTAAGACTTGTTAATGTGCTCATCATGACAAAGGCTGTGCGCAGTAGGATACTCAAGGATGCGAATGGTGATATTAGTGATCATCTACGCAACCATATCCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAGAACAGCCCCATTCTTGCTGATAGGTCGCTTATGAGGGACCTAGTTGTGTTGCAGAGGTCACGCTCTCTGAGAGACCCTTCAGCAAGTCCTCCTTCATGGCATTCTCCTTCTATAATCGAGGTTCTTTCTAAGAGGGTGGACAATGATGCTGTGGTTCAGGAGGGAAGAAGGTCTGTAGGAAATGAACACCGGAAAGAAGGAAGGCGATTGTCTGGAACCTCACCACCTGTTGTTAGTTTAGGTCCTTCAAAAGTTGCTCCAGGTGAAGAGAGCCGAGGTTATGATGGAGGAGGGTCGGCGAGTAGAGATAGAAGTAGCAGGAGTGGAATTGGGGGTGGGCGGAAAGTTGGAAGAGATGAGTCTGGTAGGAGGAGTGACAGGCCTGATTACATGGGTCTCAGTGTAGAGCAACTTCACAGTCAACTTGGCAAAGATTTGGCTCAGGATGTTATTTCAAGGCATTCTGAATCTAAAGAGAGAAAGAGCAAACAAAGGGGAAAGCATGTTCAAGATGTTCAGGCGAAGACCCTTTCTGAGCAGCTGAATGATGTTCCAATGGATAGTGATGATTTGGCATCTTCAAACAATAATGTTCACAGAAGGTTTCCTAGGCAGCAGAAAATTATTGAGGCACCAGAAGCCAGCACACGTGGTCATGGAAATGGAGTAAATAGGGGAAAAAGACGTAAATTTCGAAGTGCAAGAAGAGCTCGAGCTTCTGTGGCCTCTAAAGATACTGGAGCTGAGAATGAACTGTCTGTTGCTTCCAACTCATTTGCTCATTGTTCAGCCCACCATAAATATCACATGGAAGAGGCAGATGAGTATGGAGAAGAAAATGTCACCAGGGCACCCAAAAATGGGTGTGGCATTCCTTGGAATTGGTCTAGAATTCATCACAGAGGTAAAACATTCCTTGACATGGCTGGACGAAGCTTTTCTTGTGGTTTATCTGATTCAAGACTAAAGAAAGGGGCATTGGATGCCAATGGAAGAAATATTTCTGACATGCCTGTAGCTTCTGATCAATCAAGCTCATTTACCAGGTCTGAAGGAGAGGCGCTGCCTCTACTAATTGAAGCATCTGGATCTCAGGGAAGCACTGAGAATGCTTGTTGGGGGCATGACTATTCTGGGGAGCTTGGTATTTTTGCTGATAATTTATTGAAGCGTGACATTGATTCTGACCTCGCTTCTGAAGCTAGATCTGGGGATCAGCATAAGATGAGAGGGAATCGCCGCCGCAGGCATCAAAGCTTAACACAAAAATATCAGCCACAAACCTTCGGAGATTTAGTTGGGCAGAATTTGGTGTCACAAGCTCTCTCGAATGCAGTCATGAGAAGAAAAATTGGATTTCTGTATGTTTTTTATGGACCCCATGGCACTGGAAAAACTTCTTGTGCTCGGATATTTGCTAGAGCTTTAAATTGTCATTCTCCTGAACACCCAAAACCATGTGGCTTTTGCAATTCTTGTGTAGCACATGATATGGGCAAGAGCAGAAGTACAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAGCATCATGGATCTACTTGACAACATGATTGTTTCCCAGCTTGCATCACAATACAGAGTGTTTATTTTTGATGATTGTGATACTCTGTCAGCTGAATGCTGGAGTGCCATGTCGAAGGTCATTGATCGAGCTCCTAGACGTGTGGTTTTTATACTTGTTAGTTCGTCTCTTGATGGATTGCCTCATATAATCATATCCAGGTGTCAGAAATTTTTCTTCCCAAAGCTGAAGGATTCAGACATTATGCATAAATTAGAGGGGATTGCAAAGAAAGAGCGTTTAGAAATTGATGGGGATGCCTTGAAACTTATTGTATCAAGATCAGACGGATCATTGAGAGATGCTGAGATGACCCTTGAGCAACTTAGTTTGCTTGGGCAGAGAATATCAGTTCCTCTTGTCCAGGAATTAGTTGGGCTTATCTCTGATGAGAAATTGATTGATCTGCTTGATTTGGCACTATCCGCAGACACAGTCAACACTGTGAAGAATTTGAGAGTGATAATGGAAACTGGTGTTGAGCCCTTAGCCTTAATGTCACAGCTTGCAACTGTAATTACTGACATACTTGCAGGGACCTATGATTTCACAAGAGAAAGGAGGAGAAGGAAGTTTTTCCGGAGATATCCATTATCAAAAGAAGATATGGAAAAGCTGCGCCAGGCTTTGAAAACTTTGTCTGAGGCTGAGAAACAGTTAAGGATGTCCAATGACAAACTAACCTGGCTGACGGCTGCGTTGCTTCAACTCGCTCCTGACCAGCAATATATGCTGCCAAACACATCATCTGATAACAGTTTCAATCATAGTCCCTTGCCTGTAAATAATGCAGATGGGAGAGAAGCAACCAGAAGAACAAGTACTAATGTTGAAATTCCTCGCAAAGAGAGGCGTTTATCAATGGATTCTAGAATGGAGAATATCCATGCTGCTAGTTCTGCTGATGGTATGGCAAAGAGTCTTAGCTCAGATAATAAAAGACTTGCTGTGGCTGGTTTTCTGCCTCAACAGATATCTTCACATGCTACTGATATGATTAGAATGAATGATCGACAGACTCTGAGTAAAAACCGGAAAGGAGTTGAAGAGATATGGTTGGAGGTGCTTGACAGAATTCAGGTTAATGGTCTAAAAGAGTTTTTAAACAGAGAAGGGAAGCTAGTCTCTGTTAGTTTTGGTGCAGCTCCAACCGTGCAGTTAATGACTAGTTCCCAACAGACCAAATCTACTACGGAGAAGTTCAGGGGCCATATTTTACAGGCATTTGAATCTGTCCTTGGATCTCCTGTAACGTTAGAAATTAGATTTGAATCAAACAGAGACGCAGGATCAGGGTCTCAACTCCCTCTTATACTGCCTGCTACCAAAGATAGTTGTTCTGTAGAAAAGAAAATGAGTGAAATTGTGGAAGAAGAAGCAGCTTCTCCGAAGGACCACAAGAATAATGAGCAGCATAACAAAAAGCCAATTGTGACTTCACACATAGAAAGAAGGAGGCTTAGGGAACAAGGTCAGAGCCGAAGCATTGTGAAAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAGGCAGAAGGACATACACAGCGTAGTGCTTGGTCAAAACGCAAAGCAGTTTCCATTGCTGAAAAGCTTGAACAAGAGAATCTGAGACTAGAGCCAAGATCAAGGACCTTGCTATGCTGGAAAGCATCAAGAGTAACACGGCGGAAGCTTTCGCGTTTGAAAGTTAGAACCAGAAAACCTCATACGTTGCTGAATCTGGTCTCATGTGGAAGATGTCTCAGTTCTAAATCTCCAAGGTAG 3543 0.431 MIETVRLASSPFLLIQLLRLVNVLIMTKAVRSRILKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSLMRDLVVLQRSRSLRDPSASPPSWHSPSIIEVLSKRVDNDAVVQEGRRSVGNEHRKEGRRLSGTSPPVVSLGPSKVAPGEESRGYDGGGSASRDRSSRSGIGGGRKVGRDESGRRSDRPDYMGLSVEQLHSQLGKDLAQDVISRHSESKERKSKQRGKHVQDVQAKTLSEQLNDVPMDSDDLASSNNNVHRRFPRQQKIIEAPEASTRGHGNGVNRGKRRKFRSARRARASVASKDTGAENELSVASNSFAHCSAHHKYHMEEADEYGEENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSFSCGLSDSRLKKGALDANGRNISDMPVASDQSSSFTRSEGEALPLLIEASGSQGSTENACWGHDYSGELGIFADNLLKRDIDSDLASEARSGDQHKMRGNRRRRHQSLTQKYQPQTFGDLVGQNLVSQALSNAVMRRKIGFLYVFYGPHGTGKTSCARIFARALNCHSPEHPKPCGFCNSCVAHDMGKSRSTREVGPVSNFDFESIMDLLDNMIVSQLASQYRVFIFDDCDTLSAECWSAMSKVIDRAPRRVVFILVSSSLDGLPHIIISRCQKFFFPKLKDSDIMHKLEGIAKKERLEIDGDALKLIVSRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLIDLLDLALSADTVNTVKNLRVIMETGVEPLALMSQLATVITDILAGTYDFTRERRRRKFFRRYPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYMLPNTSSDNSFNHSPLPVNNADGREATRRTSTNVEIPRKERRLSMDSRMENIHAASSADGMAKSLSSDNKRLAVAGFLPQQISSHATDMIRMNDRQTLSKNRKGVEEIWLEVLDRIQVNGLKEFLNREGKLVSVSFGAAPTVQLMTSSQQTKSTTEKFRGHILQAFESVLGSPVTLEIRFESNRDAGSGSQLPLILPATKDSCSVEKKMSEIVEEEAASPKDHKNNEQHNKKPIVTSHIERRRLREQGQSRSIVKSKVSLAHVIQQAEGHTQRSAWSKRKAVSIAEKLEQENLRLEPRSRTLLCWKASRVTRRKLSRLKVRTRKPHTLLNLVSCGRCLSSKSPR 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1495 1180 MobiDBLite consensus disorder prediction 213 236 - -
Acco03g1495 1180 NCBIfam DNA polymerase III subunit gamma/tau 482 830 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Acco03g1495 1180 SUPERFAMILY post-AAA+ oligomerization domain-like 727 830 IPR008921 GO:0003677|GO:0006260
Acco03g1495 1180 Coils Coil 792 819 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 208 309 - -
Acco03g1495 1180 Gene3D - 657 719 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 843 868 - -
Acco03g1495 1180 SMART AAA_5 515 656 IPR003593 GO:0016887
Acco03g1495 1180 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 485 893 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 115 194 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 1052 1073 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 177 194 - -
Acco03g1495 1180 FunFam DNA polymerase III subunit gamma/tau 657 719 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 237 266 - -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 286 301 - -
Acco03g1495 1180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 703 IPR027417 -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 115 134 - -
Acco03g1495 1180 CDD HLD_clamp_pol_III_gamma_tau 656 719 IPR045085 -
Acco03g1495 1180 Pfam DNA polymerase III subunits gamma and tau domain III 712 771 IPR022754 GO:0003887
Acco03g1495 1180 Gene3D - 473 653 IPR027417 -
Acco03g1495 1180 MobiDBLite consensus disorder prediction 463 485 - -
Acco03g1495 1180 FunFam DNA polymerase III subunit gamma/tau 478 655 - -
Acco03g1495 1180 Pfam DNA polymerase III, delta subunit 499 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1495 Acco-ChrAcco03 35325506 35332974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1495 482 768 Core DNA Replication Machinery Family AT1G21690 22.569 1.63e-12 68.6