Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1481 ATGGAAACATTACCCGCAGCTAATACAAATATCAAGCCAAGAAAGAAATCATCATCCAGAGGCCACCACCGCTTTGTTGGTGTCCGCCAACGCCCGTCGGGACGGTGGGTGGCCGAGATCAAAGACTCCCTTCAGAAAGTCCGGCTTTGGCTTGGGACATTCGACTCAGCCGAGGACGCGGCCCGAGCCTACGATGCAGCCTCACGCGCTCTGCGTGGTGCCAACGCTCGCACCAACTTCGACTTGCCTGATCCCACCCTCTCTGGTGGCGCTGCCACTCAGCACGGTGGCGGCAGTTTCAGATACATGCCAGAGAATCTCGAGCCGTTCTCGTTCGAGGACACATGTGCAGGATCAGATCATCATGACCTCCTTGGAGCACTCAAGGCCAAGCTGTTTGATGACAAAGGTGAAGTGAAGAAGCTTCCTTCTCAATTATCAAATAACAGCCAAATCTTGGCAGGATTTGTAAACCCTAATAATAACAATCCTGGGTTCGCAAGTACGTCTTCTTCAAGCACAAGCAATAGTGCTAAGAGCAGTCACACTAATAATAATAATAATAATAATAATATGCTCATCTCAGATCAAGATCATGGTGGTTCTATAGCTGCAAATAATAATTCTACAGTGCCCTTTATGACGCCATCGTGGTCCAATAACAACAACGAGATAGGGAATAATTATGATCTGCCTTGGCCTAGTACAGTTCCTACACAGATGATGAACCAGGTTCCTGAAAATAATTCTGCGTGGCCATCACTATCTACAGAAGTTAATGTTATTGATCAGTGTACGATGAATATGATGTATTCAGATGTCAACCTTATTAACATCGAGGAGCAGAGAGAACATGATTCTGCAGATAGATCAGTTGTCTTGATATACACTGATTGTAATAATAATAATGACCAAAATATGATTCCGTATTCTGATAATCATGGGGCTTCAAATAGCAGGAGTGATATAGCTCAAATTGGAGGACTACTATCTCAAGGGTTTTGGCCAACAGATCAGCAGCAGCAAGTTCTTGAGCAAAGTGACAATAATGGCGGTTGGTTTAGTTCGAATAATAATAATAATAATAATGGTACGTGGGATCCTTTGCCTTTTGTGTCGTCAGAATTAGGTTGA 1134 0.4418 METLPAANTNIKPRKKSSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDSAEDAARAYDAASRALRGANARTNFDLPDPTLSGGAATQHGGGSFRYMPENLEPFSFEDTCAGSDHHDLLGALKAKLFDDKGEVKKLPSQLSNNSQILAGFVNPNNNNPGFASTSSSSTSNSAKSSHTNNNNNNNNMLISDQDHGGSIAANNNSTVPFMTPSWSNNNNEIGNNYDLPWPSTVPTQMMNQVPENNSAWPSLSTEVNVIDQCTMNMMYSDVNLINIEEQREHDSADRSVVLIYTDCNNNNDQNMIPYSDNHGASNSRSDIAQIGGLLSQGFWPTDQQQQVLEQSDNNGGWFSSNNNNNNNGTWDPLPFVSSELG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1481 377 MobiDBLite consensus disorder prediction 153 208 - -
Acco03g1481 377 FunFam ethylene-responsive transcription factor RAP2-11 23 82 - -
Acco03g1481 377 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Acco03g1481 377 SUPERFAMILY DNA-binding domain 25 81 IPR016177 GO:0003677
Acco03g1481 377 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Acco03g1481 377 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Acco03g1481 377 MobiDBLite consensus disorder prediction 347 377 - -
Acco03g1481 377 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Acco03g1481 377 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Acco03g1481 377 MobiDBLite consensus disorder prediction 347 369 - -
Acco03g1481 377 MobiDBLite consensus disorder prediction 1 25 - -
Acco03g1481 377 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 238 - -
Acco03g1481 377 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Acco03g1481 377 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1481 Acco-ChrAcco03 34911002 34912135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1481 9 80 AP2-EREBP Transcription Factor Family AT5G19790 64.384 2.22e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco03g1481 AP2 1.4e-12 CL0081