Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1450 ATGGATCAGACTTGGCGGTGTGATCTGCTAAACATGTCAGAAGACGAACACGAGATTTATAATGACAAAGATAAGGGTGAGGAAACCTCTTTGGGGTCTTCTTCTCAGAAATGTTCGTCGTTCGACTTGAATGAGGAAGCTTCCAGTGAAGAAGAAGAAGAAGATGAACAAGAACAAGATGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGAAGGAGAAAATAATAATGAAGGAACATGAAGGAGCTTCATCATCAAACAGAAGCACATCTAGAGAACGAAATAATAATGAAGGGAAAAGCACAGTGAGACAATATGTGAGATCCAAGATGCCTAGGCTTCGTTGGACTCCAGATCTTCATCTCTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCACGTGAAGAGTCATTTGCAGATGTATCGGAGTAAAAAACTTGACGAGGCTGGCCAAGGTGAGGATTATATCCTAATATTATTTGTTTTAATTATGTGCGTCCATGTTCTGCATGAAACCCTAGATGCAGTGATAAGTCAAACGTACAGATCCTCCTCGCAAGGTGGTCGTATGTCTCATCAGTTATCGTATCAATCAGTGAATACAAGTCAACAATTCAAAATGGGAAACGGTGGAATTATTCTAGCTACCAATTACAACGACCATGGTGGCTTTGTTCATTATCATGCTCTCTCCAAGCCTTCTTTTACCCTTTCACACTCACATCCAATGGCTACAGATTCAAGGCACCAACAATGGAACTTGAATAACCAGTGGTATAATAGAAGGCAAAGTTGCATGACAAACAACGAAGTGATGACGATGCCCTCAACAACAGAACGAATTGCACCCATAAGACCGAGCCAATTTCTGGAAGAGAAAAAGTGGCCTCCATTAGAAATTATTTCCAATAATAATAATAACAATAATAAACATTACTGGAAGTTCAAGAAAATAATGCCTACGACCAGTAATATTATTAATTCTTGGCCGGATACTAATAATAATATTGGCACCATGCATGCACCTGTGGAGCCAACTGATGAACCATGGAGTTTTGGAAATTTAAACAGTAACGGCAACAGTTCCAAGAGTTTGAAGCTAGAATTTGAGCCCCCATTTCGGATTAAGTTAAATGAAGAGAAAGACGAGCGATCGTTGCCTGATCTGCAACTGGGATTGAATTATCAGATTGCTGATCATTGCAAGGACACCCAAGAAATTAACACTAAGCTCTCCCTTTCTTAG 1308 0.406 MDQTWRCDLLNMSEDEHEIYNDKDKGEETSLGSSSQKCSSFDLNEEASSEEEEEDEQEQDEEEEEEEEEEKEKIIMKEHEGASSSNRSTSRERNNNEGKSTVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQGEDYILILFVLIMCVHVLHETLDAVISQTYRSSSQGGRMSHQLSYQSVNTSQQFKMGNGGIILATNYNDHGGFVHYHALSKPSFTLSHSHPMATDSRHQQWNLNNQWYNRRQSCMTNNEVMTMPSTTERIAPIRPSQFLEEKKWPPLEIISNNNNNNNKHYWKFKKIMPTTSNIINSWPDTNNNIGTMHAPVEPTDEPWSFGNLNSNGNSSKSLKLEFEPPFRIKLNEEKDERSLPDLQLGLNYQIADHCKDTQEINTKLSLS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1450 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 167 IPR017930 -
Acco03g1450 435 MobiDBLite consensus disorder prediction 45 71 - -
Acco03g1450 435 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 90 225 IPR046955 GO:0003700
Acco03g1450 435 MobiDBLite consensus disorder prediction 9 30 - -
Acco03g1450 435 SUPERFAMILY Homeodomain-like 109 165 IPR009057 -
Acco03g1450 435 Pfam Myb-like DNA-binding domain 113 163 IPR001005 -
Acco03g1450 435 Gene3D - 110 167 - -
Acco03g1450 435 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 166 IPR006447 GO:0003677
Acco03g1450 435 MobiDBLite consensus disorder prediction 72 98 - -
Acco03g1450 435 Coils Coil 43 77 - -
Acco03g1450 435 MobiDBLite consensus disorder prediction 1 104 - -
Acco03g1450 435 FunFam Myb family transcription factor 109 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1450 Acco-ChrAcco03 33991941 33997094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1450 102 172 G2-like Transcription Factor Family AT2G42660 78.873 5.44e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco03g1450 Myb_DNA-binding 8.9e-07 CL0123