Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1445 ATGGCGGTTCAAGTAGCATCGTCATCTTCGGCTGGCTTCACCAGCAAAAATAAGTATAGATACGACGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGAATCTCTATGATGCTTTGTCCAAGAAGGGAATAAGCGCCTTCATTGATGACAAGAGGCTCGGTAAAGGGGAACAAATCGCACCTTCTCTTCTTAAAGCCATAGAGAGATCCAGGATTTCAATTATTGTGTTCTCTAAGAACTACGCAACGTCCACTTGGTGCCTTGATGAACTGGCTCACATCATTCAGTGTAAGAAGGAGAAGAACCAGGTGGTTGTGCCCTTATTTTACAAGGTGGATCCGATGGATGTTCAATATCAGAAAAATAGCTTTGACAAAGCCATGGTTGCTCTTGAAGAAAGGTTCAGAAATGAGGTAGAGAAAGATAGAAACAGCTTTGAGGAAGACAGAGCTGCTCTTGAAGATAGGGTGAGAAAGAACATGGACAAAATGCAAAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGTTTGTCATCAGCATGGCTTTTCCAAGATGGATTCGAAGTTCGGTTTATTGAAAGGATTGCTGAACATGTGTATGCTATGCTTCCTCCTAAGCCATACCATAACATAGAACACATGGTTGGACTTGAGCCTCGAATAGAAGAAGTGATCTCGCTTCTGAATAAATCTGACAATGGCGTTTGCATGTTGGGGATTTATGGAACTGGTGGAATTGGTAAAACAACCCTTGCAAAAGCTATCTATAATTCAATCTTCTACGATTTTGATGGTGCTTCTTTCTTGTTTGATGTCAATGAAGCATCAAAGAAATTCCAGGGCATTGTTAATCTTCAACAAAGACTTCTATCTGAGATTCTTCAGGAAAAGATCACAAGGTTTGGTAGTGTAGGCCAAGGAATATCTAGAATAAAACACAGACTATCTCACAAAAGAGTTTTGTTGGTTATTGATGATGTTGATGAGATTGAACAATTAGAACAACTTGCAGGGGGGTGTGATTGGTTTGGTAGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTGCTAATTGCTCATGATGTTAAAAGAACGTATGAATTGAAGGAGCTAAATGATTGCAACTCTCTTGAGCTTTTTTGTCGGCATGCCTTTCATATGAGCCTACCTCCAAAAGGTTATCATCAAATGTCTAGTCATGTGATAAGTTACGCAAAGGGCCTTCCCTTGGCATTAAAGTTAATTGGTGCCAATTTAGCAAATAGAAACAAAAAGGAATGGAGGTCTATATTGGAACAATATGATCAGATCCCAGAAAGAACAATACATGAAGTATTAAAGATAAGCTATGATTGCTTACAAGATGGTGCGAAGATTATTTTCTTGGATGTTGCTTGTTTCTTTAAAGAAGAGATGTTGAATTCTCTTGGTGAAATGATACAAGCATGTTATTCTGGTGCAAGCTTTTATATTGGTGTGCTTATTGATAAATCTCTTGTAGCTATTAATGAGAATGGTCGTTTACACATGCATGATCTCGTAAAACAAATGGGCAGAGAGATTGTGAGGAAGGAGGCACCATTAAATCCTGGCAAACATAGTAGGTTATTCAATTATAAAGATGTTCTTAAAGTACTGCATGAAAATTCAGGAAGTAGGAGTATTGAAGGCATATTATTTGATCCACCTGAAGAAGTAGAAGTGGAGTGGAGTGGTCTCTCTTTTAAAAAGATGAGTAATCTTAGAATTCTTATTATTCGAAAAGCCCAATTTTCAACGGGTCCTAAATATCTTCCAGATAGTTTAAGATGGCTTGAATGGGAGGGATATCCTTCTACAAATTTACCACCAAAATTTTCTCCAAATAAATTAGTTTTCTTCAAGTTATGTTCCAGTCCTTTCAGGTTGGAAGAGCCATTGAAGAGATTTGAATGTTTGACATGTATGAATCTCTCACAGTGTGAATTCATAACTGAAGTACCTGATATGTCTCAATTCCAAAGTTTAAGAAAATTGTCTTTTAGCGACTGTCACAATTTGATCAAAGTTCACAATTCTGTGGGATATCTCTCTAAGCTGGTTGAATTAGATGTTTCTGGATGTGTCAATCTTACAAGCTTTCCACATGAAATCAATATGCCATCTCTTGAAGTTATTGATTTCGGTCATTGCGAGAGTCTTAACTACTTCCCAAATATAGTGGGAAAGATGGATGAATTAAGGAATATCTGGGCTGATTGGACTTCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTATGGGGCTTGATGTTTTAGGTTTAAGCAATTGCGAAAGTCTTAGGGAGCTTCCAAATGGCTTATTTACGGTTCCAAATATTGATGTGCTTCAATTGGGAGGCAGTAAACTTGGTTGTAGAAAATTGCTAGAGAAATTGAAGCAAGAGAGCCAACAAGTTATTGGCTGCACAAACGCGCATTCATTAGATCTCCAAGATTGTTGTTTATTGGATGAAGATATTCACCTAGCTATGAATCTTTTCCGGAATTTGATAGAGTTAAATCTATCAGGGAATGATTTTGTGTCCCTTCCTGAGTGCCTCAAAGATTGTGATCAGTTGTGGGACTTGGATGTGAGTAACTGCAAGAGGCTAAGAAATATACCAGAGTTACCAACAAGTTTGTCGAGTATAAAGGCAAGGAATTGCTTTTCATTAACTACAGAGTCATTAGGCCATTTATGGTCTCTAGTTTTTCACAAGGAGTTGAATGATCTGAAGTTCATTTTCCCAGCAACAACATTTCCTGATTGGTTCCACAATTCGTGTGGAGGAGGGAAAATTTCTTTTCTTGCTCGTAGGAATTTTCCTCCTCTTGCCATTGCTCTTGAGCTTGGGAAAGCCAAAAGAAATTGGAGACAGGACTTACAAATTTCTCTGATCATCAATGGTCGTGTATTATTACAGAATACACTTGGTGTCTATGATGCGCAAGGTCATGTGGTTTTATTGAATCTAATACCGCATTTTTCGTCAGAAGATTGGAGGTGGGTTCAAAGATTATTCACGGAACCGCATTGGAATGATGTGGTGATACATGTCATCGGTGAAACGCCAGATATAATTGTGGTTAAGGGTGGAGTTTATGTGTACCAACATCAAACAAACATGGAAAATGTACAGTTCAAACCTCCTTTGCTTTCAACAACACCACGGAAACGAAGAACCGTAGCTTCTCCTCCTAATGATAAATGA 3255 0.3831 MAVQVASSSSAGFTSKNKYRYDVFLSFRGEDTRKCFTVNLYDALSKKGISAFIDDKRLGKGEQIAPSLLKAIERSRISIIVFSKNYATSTWCLDELAHIIQCKKEKNQVVVPLFYKVDPMDVQYQKNSFDKAMVALEERFRNEVEKDRNSFEEDRAALEDRVRKNMDKMQKWRSALFEAASLSSAWLFQDGFEVRFIERIAEHVYAMLPPKPYHNIEHMVGLEPRIEEVISLLNKSDNGVCMLGIYGTGGIGKTTLAKAIYNSIFYDFDGASFLFDVNEASKKFQGIVNLQQRLLSEILQEKITRFGSVGQGISRIKHRLSHKRVLLVIDDVDEIEQLEQLAGGCDWFGSGSKVIITTRNKQLLIAHDVKRTYELKELNDCNSLELFCRHAFHMSLPPKGYHQMSSHVISYAKGLPLALKLIGANLANRNKKEWRSILEQYDQIPERTIHEVLKISYDCLQDGAKIIFLDVACFFKEEMLNSLGEMIQACYSGASFYIGVLIDKSLVAINENGRLHMHDLVKQMGREIVRKEAPLNPGKHSRLFNYKDVLKVLHENSGSRSIEGILFDPPEEVEVEWSGLSFKKMSNLRILIIRKAQFSTGPKYLPDSLRWLEWEGYPSTNLPPKFSPNKLVFFKLCSSPFRLEEPLKRFECLTCMNLSQCEFITEVPDMSQFQSLRKLSFSDCHNLIKVHNSVGYLSKLVELDVSGCVNLTSFPHEINMPSLEVIDFGHCESLNYFPNIVGKMDELRNIWADWTSIKELPPSIGNLMGLDVLGLSNCESLRELPNGLFTVPNIDVLQLGGSKLGCRKLLEKLKQESQQVIGCTNAHSLDLQDCCLLDEDIHLAMNLFRNLIELNLSGNDFVSLPECLKDCDQLWDLDVSNCKRLRNIPELPTSLSSIKARNCFSLTTESLGHLWSLVFHKELNDLKFIFPATTFPDWFHNSCGGGKISFLARRNFPPLAIALELGKAKRNWRQDLQISLIINGRVLLQNTLGVYDAQGHVVLLNLIPHFSSEDWRWVQRLFTEPHWNDVVIHVIGETPDIIVVKGGVYVYQHQTNMENVQFKPPLLSTTPRKRRTVASPPNDK 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1445 1084 Gene3D - 210 372 IPR027417 -
Acco03g1445 1084 Coils Coil 141 161 - -
Acco03g1445 1084 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 786 IPR044974 GO:0006952
Acco03g1445 1084 Pfam TIR domain 21 171 IPR000157 GO:0007165
Acco03g1445 1084 SMART till_3 20 182 IPR000157 GO:0007165
Acco03g1445 1084 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 209 - -
Acco03g1445 1084 SUPERFAMILY "Winged helix" DNA-binding domain 448 553 IPR036390 -
Acco03g1445 1084 Gene3D - 14 209 IPR035897 -
Acco03g1445 1084 PRINTS Disease resistance protein signature 319 333 - -
Acco03g1445 1084 PRINTS Disease resistance protein signature 718 734 - -
Acco03g1445 1084 PRINTS Disease resistance protein signature 242 257 - -
Acco03g1445 1084 PRINTS Disease resistance protein signature 412 426 - -
Acco03g1445 1084 Pfam NB-ARC domain 225 445 IPR002182 GO:0043531
Acco03g1445 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 470 IPR027417 -
Acco03g1445 1084 ProSiteProfiles TIR domain profile. 19 208 IPR000157 GO:0007165
Acco03g1445 1084 MobiDBLite consensus disorder prediction 1065 1084 - -
Acco03g1445 1084 Gene3D Ribonuclease Inhibitor 575 742 IPR032675 -
Acco03g1445 1084 SUPERFAMILY L domain-like 572 922 - -
Acco03g1445 1084 Gene3D - 377 461 IPR042197 -
Acco03g1445 1084 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 137 IPR035897 -
Acco03g1445 1084 Gene3D Ribonuclease Inhibitor 743 930 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1445 Acco-ChrAcco03 33904697 33909423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1445 21 801 WRKY Transcription Factor Family AT4G12020 28.892 3.24e-86 305