Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1444 ATGGCGGTTCAAGTAGCATCGTCATCTTCGGCTGGCTTCACCAGCAAAACTAAGTATAGATACGACGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGAATCTCTATGATGCTTTGCGCAAGAAGGGAATAAACGCCTTCATTGATGACAAGAAGCTCGGTAAAGGGGAACGAATCGCACCTTCTCTTCTTAAAGCCATAGAGAAATCCAGGATTTCGATTATTGTGTTCTCTAAGAACTACGCAACTTCCACTTGGTGCCTTGATGAACTGGCTCACATCATTCAGTGTAAGAAGGAGAAGAACCAGGTGGTTGTGCCCTTGTTTTACAAGGTGGATCCGATGGATGTTCAATATCAGAAAAATAGCTTTGAGGAAGCCATGGTTGCGCTTGAAGAAAGGTTCAGAAATGAGGTGGAGAAAGATAGAAGCAGCTTTGAGGAAGACAGAGCTGCTCATGAAGTTAGGGTGAGAAAGAACATGGAGCAGCTGCAAAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGTTTGTCATCTGCGTGGCTTTTCCAAGATGGGATTGCTGAACATGTGCATGCTATGATTCCTCCTAAGCCATACCACAACATAGAACACATGGTTGGACTTGAGGCTCGGAAAGAAGAAGTGATTTCACTTCTTAATAAATCTGACAAAGGCGTTTGCATGTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACCACCCTTGCAAAAGCTATCTATAATTCAATCTTCTACCAATATGAAGGGCTAAATGTTCATGACTCTCTTGAACTCTTTTGTTGGCATGCATTTCATATGATCCTACCTCCAAAAGACTATCAACATATGTCTAGTCATGTCATAAGTTATGCAAATGGCATCCCTCTGGCTTTAAAATTAATTGGTGCCAATTTAGAAAATAAAAACTTGCAGGAATGGAGGTCTACATTGGAACAATATGATCGGATCCCTGAAAGAACATTGCATGAAGTATTAAAGATAAGCTATGATTGCTTACAAGAAGGTGCTAAGATTATTTTCTTGGATATTGCTTGCTTCTTTAAAGAGAAGCTGTCGGGTTCTATTGATGAAATAGCTGAAGCTTGTGATTATGGTGCACGATTTTATATTGAAGTGCTCATTGATAAATCGCTTTTATCGATTAATCATAATGATCATTTATGCATGCATGATCTGATAAAACAAATGGGTAGAGAGATTGTTAGGAAGGAGGCACCATCAAATCCTGGCAAACGTAGTAGATTATGGAATTATAAAGATGTTCTTAAAGTACTACATGAAAATTCAGGAAGCAATAATATTGAAGGAATAGTTTTTGATCCGCCTCAACAAGAAGAAGTGGAGTGGAGTGGTAAAGCCTTTAAGAAGATGAATAATCTTAGAATTCTTATTATTCGAAGGGCCCAATTTTCAACTGGCCCTAAATATCTTCCCAATAATTTGAGATGGCTTGAATGGCAAGGGTATCCTTCTACACAATTGCCACCAAATTTTTCTCCAAACAAGCTAGTTGTCTTCAAGTTATGTTACAGTCCTTTCAGGTTGGAAGAGCCATTCAAGAGATTTGAATATTTGACATGTATGAATTTCTCACAATGTGAGTTCATAACTGAAGTACCTGATATGTCTCAATTCCAAAGTTTAAGGAAATTGTCGTTTAGTGACTGTTACAATTTAGTCAAAGTTCATGATTCAGTGGGATCTCTCTCTAAGCTGGTTAAATTATATGTTGATGGATGCGTCAGACTTACAAGCTTTCCACATGAAATCAATATGCCATCTCTTGAAGATATTATTTTCAGTCATTGCAAGAGTCTGGACTACTTCCCACATATAGTGGGAAAGATGGATGCATTAACGGATGTTTGGGTTGACGACACTTCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTTCCGGGCTTGAATCTTTAAATTTAAGCTCATGCAAAAGTCTTAAAGAGCTTCCAAACAGCTTATTCATGTTGCAAAATCTTAACTGGCTTGATTTGGGAGGCATTCAACCTGATAGCAGAAAATCTTTAAAGATATTATTGCTAGAGAGCCAACCAGTTAGCTGCACAAATGTAGAGTTCTTGATTCTAAAAAATTGTTGTCTATTGGATGAAGATATTCAGCTGACTCTGAATCTTTTCCGGAATTTGATAGAGTTAGATGTATCAGGGAATGATTTTGTGTCCTTTCCCGATTGCCTTAAAGAGTGTGGTAGGTTGAGGCAATTGGATGTGAGTAACTGCAAGAGGCTGAGAGATATACCAGAAATACCATCATCTTTGTTGACAATAAAGGCAGAGAATTGCATGGCATTAACTACTGAGTCATTAGGCCATTTATGGTCTCAGGCAAAAAGGGAGTTCGGTGGCATGAAGATCACTTTGCCTGCAACAACATTTCCTGATTGGTTCCACAATTGGTGTGAAGGAGGGAAAATGTCTTTCCTTGCTCGTAGGACTTTCCCTCATTTGGTCTTTGCTTTTGAGTTGGGGAAAGCCAACACAAGTAGGAGACAATCATTCCATTATTCTCTGAGCATCAATGGTCGTATAGTACAACAAAGATATGATGGTGTCCTAATTAGACAAGGCCATGTGTCTTTATTTAATCTTGGAGTGGCTTTTAAGGGAGAAGACTGGAGGTGGGTTCAAAGATTCATGGAATTGGATTGGAATGATGTGGAGATACAAGTCATTGGCTCAATGCCAGAAATAGATGTGGTTAAGTGTGGAGCTTATGTGCGCAAACAGCAAATAAACATGGAGAATATCAGATTCAAGTCTCCTATTATGCTTTCCATGAATGCTCCAAATACTTCACTGAAACGAAGAGCCATAGCTTCTCCTCCTAATGAACTACCCAAGAAGGTCCTGAGAAAGTTTAAGGTTGCTGATAAAGGAGAGATCAATAACAAAAAGAAAGCTTCAAGGAGAAAAAAACGACAGCAATTTTTTCATAAGCGTTGCAAGAGATGA 3030 0.3904 MAVQVASSSSAGFTSKTKYRYDVFLSFRGEDTRKCFTVNLYDALRKKGINAFIDDKKLGKGERIAPSLLKAIEKSRISIIVFSKNYATSTWCLDELAHIIQCKKEKNQVVVPLFYKVDPMDVQYQKNSFEEAMVALEERFRNEVEKDRSSFEEDRAAHEVRVRKNMEQLQKWRSALFEAASLSSAWLFQDGIAEHVHAMIPPKPYHNIEHMVGLEARKEEVISLLNKSDKGVCMLGIHGTGGIGKTTLAKAIYNSIFYQYEGLNVHDSLELFCWHAFHMILPPKDYQHMSSHVISYANGIPLALKLIGANLENKNLQEWRSTLEQYDRIPERTLHEVLKISYDCLQEGAKIIFLDIACFFKEKLSGSIDEIAEACDYGARFYIEVLIDKSLLSINHNDHLCMHDLIKQMGREIVRKEAPSNPGKRSRLWNYKDVLKVLHENSGSNNIEGIVFDPPQQEEVEWSGKAFKKMNNLRILIIRRAQFSTGPKYLPNNLRWLEWQGYPSTQLPPNFSPNKLVVFKLCYSPFRLEEPFKRFEYLTCMNFSQCEFITEVPDMSQFQSLRKLSFSDCYNLVKVHDSVGSLSKLVKLYVDGCVRLTSFPHEINMPSLEDIIFSHCKSLDYFPHIVGKMDALTDVWVDDTSIKELPPSIGNLSGLESLNLSSCKSLKELPNSLFMLQNLNWLDLGGIQPDSRKSLKILLLESQPVSCTNVEFLILKNCCLLDEDIQLTLNLFRNLIELDVSGNDFVSFPDCLKECGRLRQLDVSNCKRLRDIPEIPSSLLTIKAENCMALTTESLGHLWSQAKREFGGMKITLPATTFPDWFHNWCEGGKMSFLARRTFPHLVFAFELGKANTSRRQSFHYSLSINGRIVQQRYDGVLIRQGHVSLFNLGVAFKGEDWRWVQRFMELDWNDVEIQVIGSMPEIDVVKCGAYVRKQQINMENIRFKSPIMLSMNAPNTSLKRRAIASPPNELPKKVLRKFKVADKGEINNKKKASRRKKRQQFFHKRCKR 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1444 1009 Gene3D Ribonuclease Inhibitor 443 631 IPR032675 -
Acco03g1444 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 266 706 IPR044974 GO:0006952
Acco03g1444 1009 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 197 - -
Acco03g1444 1009 Gene3D - 198 265 IPR027417 -
Acco03g1444 1009 SUPERFAMILY "Winged helix" DNA-binding domain 334 438 IPR036390 -
Acco03g1444 1009 PRINTS Disease resistance protein signature 234 249 - -
Acco03g1444 1009 PRINTS Disease resistance protein signature 650 666 - -
Acco03g1444 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 356 IPR027417 -
Acco03g1444 1009 MobiDBLite consensus disorder prediction 984 1009 - -
Acco03g1444 1009 SMART till_3 20 182 IPR000157 GO:0007165
Acco03g1444 1009 Gene3D Ribonuclease Inhibitor 632 803 IPR032675 -
Acco03g1444 1009 Pfam NB-ARC domain 258 328 IPR002182 GO:0043531
Acco03g1444 1009 Pfam NB-ARC domain 215 255 IPR002182 GO:0043531
Acco03g1444 1009 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 137 IPR035897 -
Acco03g1444 1009 MobiDBLite consensus disorder prediction 991 1009 - -
Acco03g1444 1009 Gene3D - 266 346 IPR042197 -
Acco03g1444 1009 ProSiteProfiles TIR domain profile. 19 148 IPR000157 GO:0007165
Acco03g1444 1009 Gene3D - 13 197 IPR035897 -
Acco03g1444 1009 Coils Coil 126 146 - -
Acco03g1444 1009 Pfam TIR domain 21 166 IPR000157 GO:0007165
Acco03g1444 1009 SUPERFAMILY L domain-like 452 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1444 Acco-ChrAcco03 33865085 33870015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1444 258 698 WRKY Transcription Factor Family AT4G12020 32.258 1.64e-53 202