Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1441 ATGCCCGTATTTTACAAGTTGGATCTGGAAGATGTTCAGTACCAAAGAAATAGCTTTGAGGACGCCATTGCAACCCTTAAAGAGAGGTTCAAAGATAACATAGCCAAAGTGCGAAAATGGAGATCTGCCTTGTTTGAAGCTGCTAGCTTACCATCAGAATGGCATTTTAAATATGGGTACTATTCCTATTCTAATTATACTAATCTACTTTGGAATTCAAACGAAGTCAAGTTTATTGAAAGGATTGCAAAAGATGCATATGCTATACTGCCTCCTAAACGCTTCTATAACAGTGATTATATGGTTGGACTTGAGCCTCGCATAGAAGAAGTGATGTCACTATTGGACCAAAATGATAATAGTACATGTATGCTGGGAATTCATGGAATTGGTGGAATTGGCAAAACAACCCTTTCAAAAGCTGTCTATAATTCCATCTTCTATCATTTTGAAGATGGAAGAATTCATCTTGTGTTGCAGAAAAGCTATGATTGCCTACAAGATGGTGCTAAACGTATCTTCTTGGACATTGCTTGTTTCTTTAAAGAGAAGACATTAGACTTTGTTGAAGAAATACTAGAATCTTGTTATTATGGGACAAGGTTTTATATTGAAGGAGGAAATGATATTGAAGGAATAATACTTGATCCACCTCATGGAGAAGAAGTAAAGTGGAATGGTTTAGCCTTTGAAAAGATGAATAATCTTCGGATTCTTATTATTCGAAATACCCAATTCATTACAAATCCCAAGTATCTTCCCAACCGTTTGAGGTTGCTTGATTGGGAGAGATATCCTTCTATGACTTTTCCACCAAATTTTTCTCCACCAAAACTAGTTTGCTTCAAGTTATCTAAAAGTATTTTCAAATTGGAAGGGCAGTTCCAGAAAATTGAATACGTGACATATATGGATTTCTCAGAATGTGAATTCATAACAGAAGTGCCTGATATGTCTAAATTGTTGCAAGAAAGCCACCCATTTATTAGTTTCCCAAACATAGAGGGCTTGAATCTCGCATATTGTGGCCTTTTGGATGAAGATGTTTACCATACTCTGAAATGTTTTCGGAATGTGCAAAACTTGTATCTATCAGGAAATGATTTTGTGTCTCTTCCCAAGTGCATTAAAGAGTGTACTGATATGATGTTTCTAGATATAACTTACTGTGAGAAACTAAGAGACATACCAGAGCTGCCATCAGGTTTGGAGGACATAAGGGCAAACAATTGCCCATCAGTAACAACTGAGTCGTCTAGTCGTTTATGGTTTCAGGTATTTCTCATGCCTTTGATAATTTTCATTTGTCATTTTGGACTCTAA 1323 0.3613 MPVFYKLDLEDVQYQRNSFEDAIATLKERFKDNIAKVRKWRSALFEAASLPSEWHFKYGYYSYSNYTNLLWNSNEVKFIERIAKDAYAILPPKRFYNSDYMVGLEPRIEEVMSLLDQNDNSTCMLGIHGIGGIGKTTLSKAVYNSIFYHFEDGRIHLVLQKSYDCLQDGAKRIFLDIACFFKEKTLDFVEEILESCYYGTRFYIEGGNDIEGIILDPPHGEEVKWNGLAFEKMNNLRILIIRNTQFITNPKYLPNRLRLLDWERYPSMTFPPNFSPPKLVCFKLSKSIFKLEGQFQKIEYVTYMDFSECEFITEVPDMSKLLQESHPFISFPNIEGLNLAYCGLLDEDVYHTLKCFRNVQNLYLSGNDFVSLPKCIKECTDMMFLDITYCEKLRDIPELPSGLEDIRANNCPSVTTESSSRLWFQVFLMPLIIFICHFGL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1441 440 Pfam NB-ARC domain 107 164 IPR002182 GO:0043531
Acco03g1441 440 Pfam TIR domain 1 86 IPR000157 GO:0007165
Acco03g1441 440 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 151 IPR044974 GO:0006952
Acco03g1441 440 SUPERFAMILY L domain-like 214 416 - -
Acco03g1441 440 Coils Coil 9 29 - -
Acco03g1441 440 Gene3D - 1 92 IPR035897 -
Acco03g1441 440 Gene3D - 93 202 IPR027417 -
Acco03g1441 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 247 IPR027417 -
Acco03g1441 440 PRINTS Disease resistance protein signature 377 393 - -
Acco03g1441 440 PRINTS Disease resistance protein signature 124 139 - -
Acco03g1441 440 Gene3D Ribonuclease Inhibitor 203 422 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1441 Acco-ChrAcco03 33821357 33832268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1441 206 397 WRKY Transcription Factor Family AT4G12020 26.446 2.80e-10 60.8