Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1439 ATGGCGGTTCAAGTAGCATCGTCATCTTCGGCTGGCTTCACCAGCAAAACTAAGTATAGATACGACGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGGATCTCTATGATGCTTTGTCCAAGAAGGGAATAAGCGCCTTCATTGATGACAAGAGGCTCGGTAAAGGGGAACAAATCGCACCTTCTCTTCTGAAAGCCATAGAGAGATCCAGGATTTCAATTATTGTGTTCTCTAAGAACTACGCAACTTCCACATGGTGCCTTGATGAACTGGCTTACATCATTCAATGTAAGAAGGAGAAGAGCCAGGTGGTTGTGCCCTTGTTTTACAAGGTGGATCCCATGGATGTTCAATATCAGAAAAATACCTTTGAGGAAGCCATGTTTGCTCTTGAAGAAAGGTTCAGAAATGAGGTAGAGAAAGATAGAAACAGCTTTCAAGAAGATAGAGCTGTTTATGAAGATAAGTTGAGAAAGAACATGGAGAAGCTGCAAAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGTTTGTCATCTGAGTGGCTTTTCCAAGATGGGATTGCTGAACATGTGTATGCTATGCTTCCTCCTAAGCCATACCATAACATAGAACACATGGTTGGGCTTAAGCCTCGGATAGAAAAAGTGATCTCGCTTCTAAATAAATCTAACAAAGGCGTTTGCATGTTGGGGATTTATGGAACCGGTGGAATTGGTAAAACAACCCTTGCAAAAGCCATCTATATTTCAATCTTCTACCATTTTGATGGTGCTTGTTTCTTGTTTGATGTCAATGAAGCATCAAAGAAATTCCAGGGCATTGCTAATCTTCAACAAAAACTTCTATCCAGAATAAAACACAGACTCTCTGATAAAAGAGTTTTGTTGGTCCTTGACGATGTTGATGAGATTGAACAGTTAGAACAACTTGCTGGCGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACCAGAAATAAGCAATTGCTAATTGCTCATAATGTTAATAGCACCTATGAATTGGTGGGTCTAAATAAAAGTGACTCTCTTGAACTCTTCTGTTGGCATGCGTTTCATATGAGCCTGCCTCCAAAAGGCTATCAACATATATCTAGTCATGTGATAAGTTATGCAAAGGGCCTTCCTTTGGCTTTAAAATTAATTGGTACCAATCTAGCAAATAAAAACTTAAAGGAATGGAGGCCTATATTGGAACAATATGATCAGATGCCAGAGAGAACAATACAGGAAATATTACAGATAAGCTATGACTGTCTACAAGATGCTGCTAAGGGAAGTAGTATTATTGAAGGGATAATGCTGGATCCACCTCAACAAGAAGAAGTAAAGTGGAGTGGTTTTGTTTTTGAGAAGATGAATAATCTTAGAATTCTTATTGTTCGAAAAACCCAATTTTCAACTGCCCCTAAATATCTCCCTAATAGTTTGAGATGGCTTGAATGGGAGGGGTATCCTTCAGCAAAATTACCACCAAATTTTTCTCCAAACAAACTAGTCTTATTCAAGTTACCTTGCAGTCCATTCAGGTTGGAAGAGCCGTTCAAGCGATTTGAATGCTTGACATGTATGAATTTCTCACATTGTGAATTCATAACTGAAGTACCTGATATGTCTCAATTCCAAAGTTTAAGGAGATTGTTGCTTGAAGAATGTAACAATTTGATCAAAATACACCATTCAGTGGGATATCTCTCTAAGCTGATCCGCTTAAATGTTCGCGGATGCGTCAAACTTACAGTCTTTCCCCATGAAATCAATATGCCATCTCTTCAAAATATTGTTTTGAGCAATTGCAAGAGTCTTGACTACTTCCCAAATATAGTGGGAAAGATGGATGCATTAACGGATGTTTGGCTTGAACACACATCTATTAAGGAGCTCCCACCTTCGATTGAAAATCTTGCTGGGCTTGAATCTTTAAGTTTAAGCAATTGCAAAAGTCTTAGGGAGCTTCCAAGCAGCTTGTTCACATTGCAAAATCTTTACTGGCTTGAGTTAGAAGGCATTCAACCTGATATCAGAAAATCTTTGAAGAAATTAATGCAAGAGAGCCAGCGCGTTATTAGCTGCTCAAGTGTAGAGTTCTTGTATCTCAAAAATTGTTGTCTATCGGATGAAGATATTCACCTTGCTCTGAATCTTTTCCGGAATTTGATAGAGCTAAATCTATCAGGGAATGATTTTGTGTCCCTTCCCGAGTGCCTTAAAGAGTGTCATTTGTTGTCGAATATGCAAGTGAAAAATTGCAAAAGACTAAGAGATATACCTGAGTTACCATCAAATTTGGTGAACATAGATGCAGAGAATTGCATTTCATTAACTACAGAGTCATTAGGCCATTTATGGTCTCAGGCAAAACTGGAGACTTATGGCACGAGAATCATTTTGCCAGCAACAACATTTCCTGACTGTCTCCACAATTGGTGTGAAGGAGGGAAAATATCTTTTCTTGCTCGATGGAATTTACCTGATGTGGTCTTTGCTTTTGAGTTGGGGAAAGCCAACACGAGTATGAGACAGTTATTCCATATTTCTGCGAGCATCAATGGTAGAGTAACGCTGAATTCAGATATAAGTATCACAATTTTACAAGGTCATCTATATTTATTTGATTTAAGATCGGCTTTTGGAGGAGAAGACTGGAGGTGGCTTCAAAGATTCATGGTATTGGAATGGAATGATGTGGAGATACAAGTCGCCCGTGAAATGCCAGATATAGTTGTGGTTAGGTGTGGAGTTTATGTGTATGAACGGCAAACAAACATGGAGGATATCCACTTTAAGTCTCCTAGTCCTATTATGCTTTTCTTGAATAATGCTCCAACAACTTCACTTAAACCAAGAGCCGTGGCTTCTCCTCCTAATGGACGTCCCAACAAGAAGTTTCTGAGAAGATTAAAGGTTGCTGATAAAGGAAAACTCGATAAAACAAAGAAAGCTTCAAGGTGTGCTTCGACTTGA 3006 0.3909 MAVQVASSSSAGFTSKTKYRYDVFLSFRGEDTRKCFTVDLYDALSKKGISAFIDDKRLGKGEQIAPSLLKAIERSRISIIVFSKNYATSTWCLDELAYIIQCKKEKSQVVVPLFYKVDPMDVQYQKNTFEEAMFALEERFRNEVEKDRNSFQEDRAVYEDKLRKNMEKLQKWRSALFEAASLSSEWLFQDGIAEHVYAMLPPKPYHNIEHMVGLKPRIEKVISLLNKSNKGVCMLGIYGTGGIGKTTLAKAIYISIFYHFDGACFLFDVNEASKKFQGIANLQQKLLSRIKHRLSDKRVLLVLDDVDEIEQLEQLAGGCDWFGCGSKVIITTRNKQLLIAHNVNSTYELVGLNKSDSLELFCWHAFHMSLPPKGYQHISSHVISYAKGLPLALKLIGTNLANKNLKEWRPILEQYDQMPERTIQEILQISYDCLQDAAKGSSIIEGIMLDPPQQEEVKWSGFVFEKMNNLRILIVRKTQFSTAPKYLPNSLRWLEWEGYPSAKLPPNFSPNKLVLFKLPCSPFRLEEPFKRFECLTCMNFSHCEFITEVPDMSQFQSLRRLLLEECNNLIKIHHSVGYLSKLIRLNVRGCVKLTVFPHEINMPSLQNIVLSNCKSLDYFPNIVGKMDALTDVWLEHTSIKELPPSIENLAGLESLSLSNCKSLRELPSSLFTLQNLYWLELEGIQPDIRKSLKKLMQESQRVISCSSVEFLYLKNCCLSDEDIHLALNLFRNLIELNLSGNDFVSLPECLKECHLLSNMQVKNCKRLRDIPELPSNLVNIDAENCISLTTESLGHLWSQAKLETYGTRIILPATTFPDCLHNWCEGGKISFLARWNLPDVVFAFELGKANTSMRQLFHISASINGRVTLNSDISITILQGHLYLFDLRSAFGGEDWRWLQRFMVLEWNDVEIQVAREMPDIVVVRCGVYVYERQTNMEDIHFKSPSPIMLFLNNAPTTSLKPRAVASPPNGRPNKKFLRRLKVADKGKLDKTKKASRCAST 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1439 1001 Gene3D - 351 435 IPR042197 -
Acco03g1439 1001 Pfam NB-ARC domain 217 437 IPR002182 GO:0043531
Acco03g1439 1001 Coils Coil 141 161 - -
Acco03g1439 1001 SUPERFAMILY L domain-like 448 805 - -
Acco03g1439 1001 Gene3D - 200 347 IPR027417 -
Acco03g1439 1001 SMART till_3 20 182 IPR000157 GO:0007165
Acco03g1439 1001 Gene3D Ribonuclease Inhibitor 618 823 IPR032675 -
Acco03g1439 1001 PRINTS Disease resistance protein signature 386 400 - -
Acco03g1439 1001 PRINTS Disease resistance protein signature 293 307 - -
Acco03g1439 1001 PRINTS Disease resistance protein signature 647 663 - -
Acco03g1439 1001 PRINTS Disease resistance protein signature 234 249 - -
Acco03g1439 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 443 707 IPR044974 GO:0006952
Acco03g1439 1001 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 195 - -
Acco03g1439 1001 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 137 IPR035897 -
Acco03g1439 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 439 IPR027417 -
Acco03g1439 1001 Pfam TIR domain 21 175 IPR000157 GO:0007165
Acco03g1439 1001 Gene3D Ribonuclease Inhibitor 455 617 IPR032675 -
Acco03g1439 1001 Gene3D - 15 199 IPR035897 -
Acco03g1439 1001 ProSiteProfiles TIR domain profile. 19 200 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1439 Acco-ChrAcco03 33787896 33792996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1439 440 683 WRKY Transcription Factor Family AT4G12020 36.502 1.23e-31 132