Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1430 ATGGCGGTTGAAGTAGCATCGTCATCTTCGGCTAGCTTCACCAGCAAAACTAAGTATAGATACGACGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGAATCTCTATAGTGCTTTGCGCAAGAAGGGAATAAACGCCTTCATTGATGACAAGAAGCTCGGTAAAGGGGAACAAATCGCACCTTCTCTTCTAAAAGCCATAGAGAAATCCAGGATTTCGATTATTGTGTTCTCTAAGAACTACGCAACATCCACTTGGTGCCTTGATGAACTGGCTCACATCATTCAGTGCAAGAAGGAGAAGAACCAGGTGGTTATGCCCTTATTTTACAAGGTGGATCCGATGGATGTTCAATATCAAAAAAATTGCTTTGAGGAAGCCATGGTTTCTCTTGAAGAAAGGTTCAGAAATGAGGAAGAGAAGGATAGAAACAGCTTTGAGGAAGACAGAGCTGCATATGAAGATAGGGTGAGAAAGAACATGGAGAAACTGCAAAAGTGGAGGTCTGCTTTGTTTGAAGCTGCTAGTTTGTCATCTGCGTGGCTTTTCCAAGATGGATGCGAATTTCGGTTTATTGAAAGGATTGCTGAACATGTGTATGCTATGCTTCCTCCTAAGCCATATCATAACATAGAACACATGGTTGGACTAGAGCCTCGGATAGAAAAAGACCTATTGGGTTCTATTGATGAAGTAGCTGAAGCTTGTGATTATGGTGCAAGAGTACTACATGAAAATTCAGGAAGTAGTAATATTGAAGGAATAATTTTTGATCCACCTCAACAAGAAGAAGTGGAGTGGAGTGGTAAAGCCTTTAAGAAGATGAAGAATCTTAGAATTCTTATTGTTCGAAAGGCCCAATTTTCAATTGGCCCTAAATATCTTCCCAATAATTTGAGATGGCTTGAATGGCAGGGATATCCTTCTATAGAATTGCCACCAAATTTTTCTCCAAACAAGCTAGTTGTCTTCAAGTTATGTTGCAGTCCTTTCAGGTTGGAAGGGCCATTCAAGAGATTTGAATATTTGACATGTATGAATTTCTCACATTGTGAGTTCATAACTGAAGTACCTGATATGTCTCAATTCCAAAGTTTAAGGAAATTGTCGTTTAGAGACTGTTACAATTTGGTCAAAGTTCATGATTCAGTGGGATCTCTCTCTAAGCTGGTTGATTTAGATGTTTGTGGATGCGTCAAACTTACAAGCTTTCCATATGAAATCAATATGCCATCTCTTGAAGGTATTGATTTAAGTCATTGCAAGAGTCTGGACTACTTCCCACATATAGTGGGAAAGATGGATGCATTAACAGATGTTTGGGTTGAAGACACTTCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTTCCGGGCTTGAATCTTTAAATTTAAGCTCTTGCACAAGTCTTAAAGAACTTCCAAACAGCTTATTCATGTTGCAAAATCTTAACTGGCTTGGTTTGGAAGGCATTCAACCTGATAGCAGAAATTCTTTAAAGAAATTATTGCTACAGAGCCAACCAGTTAGCTGCACAAATGTACAGTTCTTGATTCTAAAAAATTGTTGTCTATTGGATGAAGATATTCACCTGACTCTGAATCTTTTCCGGAATTTGATAGAGTTAAATGTATCAGGGAATGATTTTGTGTCCCTTCCTGATTGTCTTAAAGAGTGTAGCAGGTTGCTGGATTTGGATGTAAGTAACTGCAAGAGGCTGAGAGATATACCAGAATTACCATCAAATTTGTTGAAAATAACGGCAGAGAATTGCATTTCATTAACTACAGAGTCATTAGGCTATTTATGGTCTCAGGCAAAAAGGGAGTTCGGTGGCATGAAGATCACTTTGCCTGCAACAACATTTCCTGATTGGTTCCACAATTGGTGTGAAGGAGGGAAAATGTCTTTCCTTGCTCGTAAGACTTTCCCTCATTTGATCTTTGCTTTTGAGTTGGGGAAAGCCAACACAAGTAGGAGACAATCCTTCCATTATTCTCTGAGCATCAATGGTCGTATAGTACAAAAGAGAGATGATGATATCACAGTTAGACAAGGTCATGTGTCTATATTTAATCTGGGAGTGGTTTTTGAGGGAGAAGACTGGAGGTGGATTCAAAGATTCATGGAATTGGATTGGAATGATGTGGAGATGCGAGTCATTGGCTTAAGGCCAGAAATAGCTGTGGTTAAGTGTGGAGTTTATGTGTGCAAGCAGCAAATAAACATGGAGAATATCCAATTCAAGTCTCCTATTATGCTTTCCATGAATGCTCCAACAAATTCACTGAAACGAAGAGCCATAGCTTCTCCTCCTAATGAACCACCCAAGAAGGTCCTGAGAAAGTTTAAGGTTGCTGATAAAGGAAAGATCAACAACAAAAATAAAGTTTCAAGGAGAAATAAAGGACAGCATTTTTTTCTTAACCGTTGCAAGAGAAGAAGGATGGTTTATCCAATGGGTAAGCATGTTTGGAGATTTTTGAACTATTAG 2511 0.3907 MAVEVASSSSASFTSKTKYRYDVFLSFRGEDTRKCFTVNLYSALRKKGINAFIDDKKLGKGEQIAPSLLKAIEKSRISIIVFSKNYATSTWCLDELAHIIQCKKEKNQVVMPLFYKVDPMDVQYQKNCFEEAMVSLEERFRNEEEKDRNSFEEDRAAYEDRVRKNMEKLQKWRSALFEAASLSSAWLFQDGCEFRFIERIAEHVYAMLPPKPYHNIEHMVGLEPRIEKDLLGSIDEVAEACDYGARVLHENSGSSNIEGIIFDPPQQEEVEWSGKAFKKMKNLRILIVRKAQFSIGPKYLPNNLRWLEWQGYPSIELPPNFSPNKLVVFKLCCSPFRLEGPFKRFEYLTCMNFSHCEFITEVPDMSQFQSLRKLSFRDCYNLVKVHDSVGSLSKLVDLDVCGCVKLTSFPYEINMPSLEGIDLSHCKSLDYFPHIVGKMDALTDVWVEDTSIKELPPSIGNLSGLESLNLSSCTSLKELPNSLFMLQNLNWLGLEGIQPDSRNSLKKLLLQSQPVSCTNVQFLILKNCCLLDEDIHLTLNLFRNLIELNVSGNDFVSLPDCLKECSRLLDLDVSNCKRLRDIPELPSNLLKITAENCISLTTESLGYLWSQAKREFGGMKITLPATTFPDWFHNWCEGGKMSFLARKTFPHLIFAFELGKANTSRRQSFHYSLSINGRIVQKRDDDITVRQGHVSIFNLGVVFEGEDWRWIQRFMELDWNDVEMRVIGLRPEIAVVKCGVYVCKQQINMENIQFKSPIMLSMNAPTNSLKRRAIASPPNEPPKKVLRKFKVADKGKINNKNKVSRRNKGQHFFLNRCKRRRMVYPMGKHVWRFLNY 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1430 836 ProSiteProfiles TIR domain profile. 19 208 IPR000157 GO:0007165
Acco03g1430 836 Gene3D Ribonuclease Inhibitor 252 430 IPR032675 -
Acco03g1430 836 SMART till_3 20 182 IPR000157 GO:0007165
Acco03g1430 836 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 147 IPR035897 -
Acco03g1430 836 Gene3D - 15 213 IPR035897 -
Acco03g1430 836 Gene3D Ribonuclease Inhibitor 431 614 IPR032675 -
Acco03g1430 836 Pfam TIR domain 21 164 IPR000157 GO:0007165
Acco03g1430 836 SUPERFAMILY L domain-like 266 608 - -
Acco03g1430 836 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 226 IPR044974 GO:0006952
Acco03g1430 836 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 209 - -
Acco03g1430 836 Coils Coil 126 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1430 Acco-ChrAcco03 33401714 33406713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1430 242 508 WRKY Transcription Factor Family AT4G12020 34.602 4.51e-29 123