Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1422 ATGGCACTTCAAGTAGCAGTAGCACCATCATCATCCCTTGGCTTCACCAGCAAAACCAAGTACAGATACGATGTTTTTCTAAGTTTTAGAGGTGAAGATACACGCCACAACTTCACCGTGCCTCTCTACAATGCTGTGCGACGTAAGGGAATCAACGCCTTCATTGATGACAAGAAGCTTGGGAAAGGGGAAGAGATCTCACCTACGCTTCTTAAAGCCATTGAGAGATCAAGGATTTCGATTATTGTGTTCTCTAAGAACTATGCTACTTCCACATGGTGCCTAGAAGAACTTGCTCACATCATTCGGTGTAAGAAGGAGAAGAACCAGGTGGTTATGCCCGTCTTTTACAAGGTGGATCCGTTGGATGTTCAATATCAGAGAAATAGCTTTCAGGAGGCCATGGCTGCTCTTGAAAAAAGGTTCAGTGATGACTCAGAGAAAGTGCGTAAATGGAGATCTGCTTTGTCTGAAGCTGCTAGTTTATCATCAGCATGGCTTTTTGAAAATGGATATGAGCCTGGGTTTATTGAAAGGATTGTGGAAGATGCATTTGCTATGCTACCTCCTAAACGCTTCCATAACACTGATTACATGGTTGGACTTGAGCCTCATATAGAAGAAGTGATGTCACTTTTAGATAAATCTAATGATAGAGTTTATGTGCTTAAAGTATTGCGAGAAAATTTAGGAAGTAACAAAATCAAAGGAATAATGCTTGATCCACCCAAGCAACAAAAAGTGAAGTGGAATGGTTTAGCTTTTGAGAAGATGAACAATCTTAAAATTCTTGTGGTTCGAAATGCCCAGTTTTCAACTGGCCCCAAGTATTTTCCCAATAGCTTGAGATTGCTTGACTGGGAAGGATATCCTTGTATGACCCTACCACCAGATTTTTATCCTACAAAACTAGTTTACTTCAAGTTATATAGAAGTTTCTTCACCTTCGCAGAGCCATTTAAGAAGTTTGAACATGTGACGCATATGGATTTCTCACATTGTGAATTTATAACAGAAGTACCTGATATGTCTCAGTTCCAAAGCTTAAGAAGATTGTTGTTTCAAGGATGTGACAATCTAGTCAAAGTTCATGATTCAGTGGGATATCTCTCTAGGTTGGTCCGTTTAGATGTAAGTGAATGCACCAACCTTACAAGCTTTCCACATCAAATCAACATGCCATCTCTTGAAGAGCTTAATCTCAGAGAATGTAAGAGTCTTAACTACTTCCCACATATAGTGGGAAACATGGATTCACTAACAGATATATATGTAAGTGAAACTGCCATTAAAGAGCTCCCACCTTCGATTGGAAGTCTTCCGAGGCTTGAAAATTTGTTTCTAAGGTCCTGCAGAAATCTTAGGGAGCTTCCAAACAGCTTATTGATGTTGCAAAATCTTAGCACTTTTGATTTAGGAGGTATTCAAACTCATGGCAGAGAATCTTTAAAGAGATTAATGCAAGAAAGCCAACCAGCTTTTAGCTACACAAACTTAGAGTACTTGGATCTTGAGAATTGTGGTTTGTTGGATGAAGACCTTTACCTAACATTGAATTGCTTTCAGCATGTGAGAGAGTTAAATCTTTCAAGGAATGATTTTGTGTCACTTCCTGAGTGCATTAAAGAGTGTGCTAATCTAAGGAAACTAGATGTGACTAATTGCAAGAGGCTAAGAGATATACCGAAGCTTCCATCAAAATTGGAAGACATAAGGGCAGAGAATTGCACATCATTAACTACAGAGTCATTAGGCAATCTATGGTCTCAGGCAAAAAATTGCGTTTGTCTAGGAATTGGTGCGCCAGCAACAACATTTCCTGATTGGTTCGACCATTACTGTAAAGGAGGGACATTGTCATTTTGTGTTCGTGGCAAAAATTTCCCTCGTGTTGTCATTGCAATTCAGTCCAGAAAAGCAAACACGAGGAAGAGACACTTCTTCCAAGTTTTTATGAGAATAAATGGTCGTAAAAACTCATGGATACAAAGTGATGCTCCTGATCATGCAAGTGAACAAGGTCGAGTGTTTGTTTTCTTTGGTAAACAAGGCCATGTGTTCTTATTTGATCTGCTTAAGGATTTTAGGGAACAAGAGTTGAAGGGGCTTAATAAGTTTCTAGAATTGGATTGGAATGATGTGGAAATACAGGTTACATGCCTCCCACATCATATCTCCATAGCTAAGTGTGGAGTTTATGTTGACAAGAAGCAAACAAACATGGAGAATGTGAAGTTCAAGTCTCATTTTCTTTCAAGAACTTCACTGAAACGAAGAGCCATAGCATCTCCTCCTAATGAACCACCCAAGAAGCTCATGAGAAAGTTCAAGGCTACTAATGAAGGAAAACTCACTAACACGAAGAAAAGGACACGGAGAACTAAACCATACCAAAATTTTCATTCATGGTACCAGAGAAAGATAATTTTTCCCATGGGTAAGCATCTTTGGAGATTCTTGTACTATTAG 2469 0.3913 MALQVAVAPSSSLGFTSKTKYRYDVFLSFRGEDTRHNFTVPLYNAVRRKGINAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSKNYATSTWCLEELAHIIRCKKEKNQVVMPVFYKVDPLDVQYQRNSFQEAMAALEKRFSDDSEKVRKWRSALSEAASLSSAWLFENGYEPGFIERIVEDAFAMLPPKRFHNTDYMVGLEPHIEEVMSLLDKSNDRVYVLKVLRENLGSNKIKGIMLDPPKQQKVKWNGLAFEKMNNLKILVVRNAQFSTGPKYFPNSLRLLDWEGYPCMTLPPDFYPTKLVYFKLYRSFFTFAEPFKKFEHVTHMDFSHCEFITEVPDMSQFQSLRRLLFQGCDNLVKVHDSVGYLSRLVRLDVSECTNLTSFPHQINMPSLEELNLRECKSLNYFPHIVGNMDSLTDIYVSETAIKELPPSIGSLPRLENLFLRSCRNLRELPNSLLMLQNLSTFDLGGIQTHGRESLKRLMQESQPAFSYTNLEYLDLENCGLLDEDLYLTLNCFQHVRELNLSRNDFVSLPECIKECANLRKLDVTNCKRLRDIPKLPSKLEDIRAENCTSLTTESLGNLWSQAKNCVCLGIGAPATTFPDWFDHYCKGGTLSFCVRGKNFPRVVIAIQSRKANTRKRHFFQVFMRINGRKNSWIQSDAPDHASEQGRVFVFFGKQGHVFLFDLLKDFREQELKGLNKFLELDWNDVEIQVTCLPHHISIAKCGVYVDKKQTNMENVKFKSHFLSRTSLKRRAIASPPNEPPKKLMRKFKATNEGKLTNTKKRTRRTKPYQNFHSWYQRKIIFPMGKHLWRFLYY 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1422 822 Pfam TIR domain 23 182 IPR000157 GO:0007165
Acco03g1422 822 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Acco03g1422 822 Gene3D Ribonuclease Inhibitor 409 599 IPR032675 -
Acco03g1422 822 SUPERFAMILY L domain-like 239 585 - -
Acco03g1422 822 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Acco03g1422 822 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 221 IPR044974 GO:0006952
Acco03g1422 822 Gene3D Ribonuclease Inhibitor 214 408 IPR032675 -
Acco03g1422 822 SMART till_3 22 162 IPR000157 GO:0007165
Acco03g1422 822 Gene3D - 17 194 IPR035897 -
Acco03g1422 822 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 162 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1422 Acco-ChrAcco03 33178260 33184110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1422 221 474 WRKY Transcription Factor Family AT4G12020 33.948 4.09e-31 130