Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1421 ATGATCACTCCAAATCAAGAGCCATCATCTTCTGGATCGTCCTCCATCGAATCGACTTCCCATCACTACGATGTTTTCATGAATTTCACAACCGAGACGACATTCACTACCACTCTCTGTGATTCTTTGCGCAAAAAAGGAATCGAAAAAATCTTCATCGACCCCAAGAAGTTGAGGAAGAAGAAAAGGAAACAAGTTCCTGCATCACCCGATCCTCTTACAGTAATTAAAGAATCAACGGTTTCTATTCTTGTGTTCTCTGAAGATTATGCTTCTTCCTCTGGTTGCCTTGATGAGCTCGTTGAAATTATGAAGTCCAAGAAGAAAAAGAAGAAGCAAGTGGTTTTCCCGATCTTCTACCAAATAGAACCAACGATTGTTCGGCATCAGAAAAATAAGTATGGGGAAGCCATGGATGCTCATCAACACCGCTTCGGAGACGAACGGGTTCGTAAATGGAAGAAGGCTTTGAATAAAGCCGCCGGTTTGTCCGGATGGCATTTTGAACCAGGATCTGAAAATGACGTTGTTGAGAAGATTGTTGAAGTGGCCTTTTCCAAGTTGCCGCCTAAGGGATTACATATTGGGGAGCATATAGTTGGACTCAGCACTCGCATAAAAGATATGACTTCACTTCTTGATACTGTGCCTATTTTAGGAATTCATGGAACTGCAGGAGTTGGCAAAACGACACTTGCAAAAGCTGCATACAATTCAATTGTCCACCAATTTCAAGAGGCTTGTTTTCTTTCTGACATCAGAGAAGCTCCAAAAGAATGTGAAGGCATAGTACGTCTTCAAAAGACAATTTTATCGGAGATTCGTGATGAGAAGAAAAAGATCAAGTTTAGAAGTGTAAACGAAGGAATCTCTGAGATAAAGCAGAGGCTATGTGAAAAAAGAGTTCTTCTTGTTCTTGATGACGTGGATAAGATGGAAGAATTGGAACAACTTATGGGAGGTCGGGAGTGGTTTGGAAAAGGCAGCAAAGTCATTGTGACAACAAGAAATAGGCAATTACTGATTGATGGTCATATTCATGAATATGAAATGACGGAGCTAAATAACAATGACTCTCTTGAGCTTTTCTTTCAATATGCCTTTCCCTCTGACAAACCTACAGTGGAGTATGAAGAAATGTCGAAACGGATGGTGAGTCATGCACAAGGCCTTCCTTCGGCTTTGAAAACGATGGGCTCCAAATTAAATCATAAAAGTATGGATGCATGGAAATGTGCATTGGATCAATTGGATAGACTTCCACAAAGGAAGGTTGAAGATGTTCTCAAAATAATGGGAAAGTAG 1305 0.4061 MITPNQEPSSSGSSSIESTSHHYDVFMNFTTETTFTTTLCDSLRKKGIEKIFIDPKKLRKKKRKQVPASPDPLTVIKESTVSILVFSEDYASSSGCLDELVEIMKSKKKKKKQVVFPIFYQIEPTIVRHQKNKYGEAMDAHQHRFGDERVRKWKKALNKAAGLSGWHFEPGSENDVVEKIVEVAFSKLPPKGLHIGEHIVGLSTRIKDMTSLLDTVPILGIHGTAGVGKTTLAKAAYNSIVHQFQEACFLSDIREAPKECEGIVRLQKTILSEIRDEKKKIKFRSVNEGISEIKQRLCEKRVLLVLDDVDKMEELEQLMGGREWFGKGSKVIVTTRNRQLLIDGHIHEYEMTELNNNDSLELFFQYAFPSDKPTVEYEEMSKRMVSHAQGLPSALKTMGSKLNHKSMDAWKCALDQLDRLPQRKVEDVLKIMGK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1421 434 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Acco03g1421 434 Gene3D - 19 189 IPR035897 -
Acco03g1421 434 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 419 IPR044974 GO:0006952
Acco03g1421 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 431 IPR027417 -
Acco03g1421 434 Gene3D - 190 348 IPR027417 -
Acco03g1421 434 PRINTS Disease resistance protein signature 296 310 - -
Acco03g1421 434 PRINTS Disease resistance protein signature 218 233 - -
Acco03g1421 434 PRINTS Disease resistance protein signature 388 402 - -
Acco03g1421 434 Pfam TIR domain 23 168 IPR000157 GO:0007165
Acco03g1421 434 Gene3D - 353 432 IPR042197 -
Acco03g1421 434 Pfam NB-ARC domain 218 421 IPR002182 GO:0043531
Acco03g1421 434 SMART till_3 22 163 IPR000157 GO:0007165
Acco03g1421 434 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 166 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1421 Acco-ChrAcco03 33161642 33163653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1421 18 400 WRKY Transcription Factor Family AT4G12020 26.250 1.50e-28 117