Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1420 ATGGCAAGTGATTGTCAACCTCCAACGACGTGGACGTCTCTATCTTTGGAGATCACGGACACGCTGACGCAGCGAAATCCAAAGAGGAAGGCACGGGAAATTCGAGTGTGCTGGTCACTGAACGATGAAGGGTTAGCCTTGTTGGAGTTCCGAGATAGAATAACTTTTGATCCTTATGAAGCTTTGATGAATTGGAATCCTAATGATGTTAACCCTTGCAATTGGTTGGGTGTTCATTGCATTGACACTAAAGTTCAAATTCTTGACTTAAACTCCTTATCTTTGGAAGGGACATTGGACCCACGACTTGGGAAGCTTAGTCACTTAAAATCTCTTATATTGTGCAAGAACAACTTCTCTGGAACCATTCCCAAGGAACTTGGAGGTTTAGCCAAATTAGAGTTATTGGATTTAAGAGATAATAACTTTACTGGAAATATTCCAGTGGAAGTTAACAGCTTACCAGGACTAAAACACTTGTTGCTTTGCGGCAATAAAATTAAAGTCAATGTTTGTCAAGATGTTGAGGAGCCCAAATTACCTTCTAAGTGGTTATTTATGAGTTCAGCCATTGCAACATGTTTTACTGATGAACATGCATTGATTCATGTAGATTTTCATAAGCCTATGGTTGCCCAAGCTATACCAAACATCATCAATTCTGCGCGTCGCATGTTACTTGATCAATCTAGTAACCTCGCAGCTATACCTGTCAGTGTTGGTCTTACTAAACCCGTGGTTCCTTTTCCTGCAACCTTGAGTAGTGGAGCTTTCCCAGCTGTACCACGTGTCAAGCAACAAAATCTATCACCTGTACCACCTCCAACTGTGAATTCTCCACCTAATACCCAAAATCAAGAGCAATCTTCTATTGGAAAGCAAGAACATTCAACTAAAGACACTTCTAGAAATTTATGGATTTATTTAATTATTATTATTTCATTTGTGGCTGCACTGATCATCATTGCTGTGGCCATATTCTGTTTGTGGCAAGTAGGAGCGGCCAGAACAATAGCTCCTTGGAAAACAGGAATAAGTGGACAACTGCAGAAGGCATTTATAACTGGGGTTCCCAAGTTGAATCGACCAGAGTTGGAGATAGCCTGTGAGAATTTCAGCAATATTATTGATAAATTTGATGATCACACCATATACAAAGGAATATTGTCAAGTGATGTTGAGATCGCTGTTGTTTCTACTACTTTTACTTCCAAAGAATGGTCAAAGAATGAAGAGATGTTCTACAGGAAAATGATCAGTACATTGTCCCGTGTGAACCATAAGAACTTTGTCAATCTTATTGGCTTTTGTGAGGAAGAAGAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTTCTTTGTTTGATCATCTCCATGATAAGGAATATGAAGATCTTGATTGGAAGGCAAGGAAAAGGATTATCATGGGAATTGCTTATTGTTTGCAGTACATGCACCACGATCTAATTCCACCAGTAACTCAATCCATCCTTTCTTCATCTTCCATTTATTTAATGGATGATTTAGCTGCTAAGGTAGCATATCATTTTAACCGGCCATGGACGATAGATGATGAGTTTTCTGAAGAAAAGGGGTTTGGCCATTCTAAGTTGCCACCCAAAGAAGATCTTGAAACCAATGTTTATAATTTTGGAATGTTGTTGCTTGAAATAATTTCAGGAAAACTCCCTTACTCTGAAGAACAGGGTCATCTCACTGGATTGGCTGCCGATTACATAAAAAACAATAGAAGCGTCAGTGGTATGATTGATCCCATTCTGCAATCATATGAAAAGGATGAACTTGATGTGATTTGTGAAGTAATACATGATTGCATACAAGCTTATCCAAGATTAAGACCTACAATGAAGGATATAGTTTCCAAATTGAGAGGAGTCATTAACATATCACCCGAAGGAGCAGCTCCAAATCTTTCCCCTCTTTGGTGGGCTGAACTTGAAATATTGTCCGTGGAGGCCAATTAA 1995 0.391 MASDCQPPTTWTSLSLEITDTLTQRNPKRKAREIRVCWSLNDEGLALLEFRDRITFDPYEALMNWNPNDVNPCNWLGVHCIDTKVQILDLNSLSLEGTLDPRLGKLSHLKSLILCKNNFSGTIPKELGGLAKLELLDLRDNNFTGNIPVEVNSLPGLKHLLLCGNKIKVNVCQDVEEPKLPSKWLFMSSAIATCFTDEHALIHVDFHKPMVAQAIPNIINSARRMLLDQSSNLAAIPVSVGLTKPVVPFPATLSSGAFPAVPRVKQQNLSPVPPPTVNSPPNTQNQEQSSIGKQEHSTKDTSRNLWIYLIIIISFVAALIIIAVAIFCLWQVGAARTIAPWKTGISGQLQKAFITGVPKLNRPELEIACENFSNIIDKFDDHTIYKGILSSDVEIAVVSTTFTSKEWSKNEEMFYRKMISTLSRVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGSLFDHLHDKEYEDLDWKARKRIIMGIAYCLQYMHHDLIPPVTQSILSSSSIYLMDDLAAKVAYHFNRPWTIDDEFSEEKGFGHSKLPPKEDLETNVYNFGMLLLEIISGKLPYSEEQGHLTGLAADYIKNNRSVSGMIDPILQSYEKDELDVICEVIHDCIQAYPRLRPTMKDIVSKLRGVINISPEGAAPNLSPLWWAELEILSVEAN 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1420 664 SUPERFAMILY L domain-like 38 168 - -
Acco03g1420 664 ProSiteProfiles Protein kinase domain profile. 361 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1420 664 FunFam Leucine-rich repeat receptor-like kinase 44 154 - -
Acco03g1420 664 FunFam Inactive receptor-like serine/threonine-protein kinase 344 451 - -
Acco03g1420 664 PANTHER PROTEIN MALE DISCOVERER 2 36 662 - -
Acco03g1420 664 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Acco03g1420 664 MobiDBLite consensus disorder prediction 268 297 - -
Acco03g1420 664 Pfam Leucine rich repeat 107 167 IPR001611 GO:0005515
Acco03g1420 664 Gene3D Ribonuclease Inhibitor 40 224 IPR032675 -
Acco03g1420 664 SUPERFAMILY Protein kinase-like (PK-like) 358 633 IPR011009 -
Acco03g1420 664 Gene3D Phosphorylase Kinase; domain 1 347 451 - -
Acco03g1420 664 Pfam Protein tyrosine and serine/threonine kinase 384 490 IPR001245 GO:0004672|GO:0006468
Acco03g1420 664 Gene3D Transferase(Phosphotransferase) domain 1 452 547 - -
Acco03g1420 664 Gene3D Transferase(Phosphotransferase) domain 1 548 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1420 Acco-ChrAcco03 33153460 33159439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1420 91 634 Receptor kinase-like Gene Family AT5G65710 26.007 6.98e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Acco03g1420 PK_Tyr_Ser-Thr 1.4e-11 CL0016