Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1418 ATGGATTCAGAACAAAGGGAGAAGAAAGGAACAATTCTGATGCAGAAATACGAGCTAGGCCGTTTGCTAGGCCAAGGCACATTCGCCAAAGTCTACCACGCCAGAAACATCGAAACCAACCAGAGCGTCGCCATTAAAGTCATCAACAAGCAAAAAATTTTCCGAAACGGCTTAATCGACCAAATCAAACGCGAGATCTCGGTGATGCGCCTCGTAAGGCACCCAAACATCGTTCAGCTCTACGAAGTAATGGCGAGCAAGAACAAGATCTACTTCGCGATGGAGTACGTCAAAGGCGGCGAGCTCTTCGCCAAAGTCGCGAAAGGGAAATTGAAAGAGGATTTGGCGCGAAAGTATTTCCAGCAGCTAATCGGCGCCGTCGATTTCTGCCATAGCAGAGGGGTTTATCACCGAGATCTGAAACCGGAGAATCTGCTTCTGGACGAAAGTGGGGATCTGAAGATTACGGATTTTGGATTGAGTGCTTTGTATGAACCCAAAAAGAACGATGGTCTTCTCTATACAACTTGTGGGACCCCAGCTTATGTGGCCCCTGAAGTTCTCAACAGGAACGGCTATAATGGAGTCAAAGCTGATATATGGTCTTGTGGGGTTATTCTGTTTGTTCTTCTTGCAGGTTTTCTTCCATTTCAGGATAATAATCTGATTGAAATGTATAGGAAAATTAGTATAGCAGAATTCAACTGTCCCAGATGGTTCTCACCTCAAACCAGAAAACTCGTCACCACAATTCTAGATCCAAATCCAAGAACAAGAGTATGTATTTCTAAGATTATGGAAAATTGCTGGTTTAAAATCGGGTATCAAAAGATTGAACTACCCAAATCACCAGTTTCCAATCCTACAAGTGATGTTCAGGCTGTTTTTGACTCTTCATCATCAAGTCCAGAAGAAAAAACCAAAGAAACCACAATGAAAGTGAAACCATCTGTCTTCAATGCGTTTGATTTAATTTCCTTATCTTCAGGGTTTGATCTCTCTGGTTTGTTTGAGGAAGATAATTGTAGGAGACAACATGCTAGATTCACCACCACAAAGCCGGCCTCGACGATTGTGTCGAAACTGGAAGAAATAGCACAAGCAGAGAGAAAATTCAAGGTTGTGAAGAAAGATGGATTAGTGAGATTAGAGGGAAACGAAACAGGTCGGAAGGGACAACTTGGTATTGAAGCAGAGATTTTTGAGGTGACATCAACGTTTCATGTTGTGGAGGTGAAGAAAGCTGCAGGAGATACGTTTGAGTATATTGAGTTTAGAGATCAGAGCTTGAAGCCTTCATTGAAGGATATAGTGTGGGCTTGGCAAGGTGAGCAATAG 1338 0.4283 MDSEQREKKGTILMQKYELGRLLGQGTFAKVYHARNIETNQSVAIKVINKQKIFRNGLIDQIKREISVMRLVRHPNIVQLYEVMASKNKIYFAMEYVKGGELFAKVAKGKLKEDLARKYFQQLIGAVDFCHSRGVYHRDLKPENLLLDESGDLKITDFGLSALYEPKKNDGLLYTTCGTPAYVAPEVLNRNGYNGVKADIWSCGVILFVLLAGFLPFQDNNLIEMYRKISIAEFNCPRWFSPQTRKLVTTILDPNPRTRVCISKIMENCWFKIGYQKIELPKSPVSNPTSDVQAVFDSSSSSPEEKTKETTMKVKPSVFNAFDLISLSSGFDLSGLFEEDNCRRQHARFTTTKPASTIVSKLEEIAQAERKFKVVKKDGLVRLEGNETGRKGQLGIEAEIFEVTSTFHVVEVKKAAGDTFEYIEFRDQSLKPSLKDIVWAWQGEQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1418 445 Pfam NAF domain 316 376 IPR004041 GO:0007165
Acco03g1418 445 Gene3D Transferase(Phosphotransferase) domain 1 102 276 - -
Acco03g1418 445 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Acco03g1418 445 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1418 445 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Acco03g1418 445 CDD STKc_SnRK3 16 270 - -
Acco03g1418 445 FunFam Non-specific serine/threonine protein kinase 314 439 - -
Acco03g1418 445 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Acco03g1418 445 CDD CIPK_C 320 435 - -
Acco03g1418 445 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1418 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 423 - -
Acco03g1418 445 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Acco03g1418 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Acco03g1418 445 SUPERFAMILY Protein kinase-like (PK-like) 13 322 IPR011009 -
Acco03g1418 445 FunFam Non-specific serine/threonine protein kinase 11 312 - -
Acco03g1418 445 Gene3D Kinase associated domain 1, KA1 313 440 - -
Acco03g1418 445 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1418 Acco-ChrAcco03 33119284 33120621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1418 7 443 CBL-interacting serine-threonine protein kinases AT5G45820 66.516 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco03g1418 Pkinase 2e-74 CL0016