Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1417 ATGGCGGACGTCTTCGTTTCGGCGAAGAAGAAGAACAAAGCCAATCTCTTGCTAAGCCGTTTCGAAGTCGGAAAACTCCTCGGACATGGAACCTTCGCGAAGGTCTACTACGCTCAAAACATCAAAACCAAGGAAGGCGTCGCCATCAAAATCATCGACAAAGAGAAAATCCTCAAAGGCGGCTTAGTCGCTCACATCAAGCGCGAGATCTGGATCCTCCGCCGTGTCCGCCACCCTAACATCGTCCAGCTCTTCGAAGTCATGGCCACGAAGACCAAGATCTACTTCGTCATGGAATACGTCCGCGGTGGCGAGTTATTCAATAAAGTGGCAAAAGGGCGGTTAAAGGAAGAAGCGGCAAGGAAATATTTCCAGCAATTAATGTCCGCCGTAGAATTCTGCCACGCCAGAGGCGTGTACCACCGCGATCTGAAGCCGGAAAACTTGTTGCTCGACGAAAATGGCGATCTCAAGGTTTCCGATTTCGGCCTTAGTGCCGTCTCCGATCAAATCAGACAAGACGGTTTGTTTCACACTTTTTGTGGAACGCCGGCGTATGTTGCACCTGAGGTTCTGGCAAGAAAAGGATACGACGGAGCCAAAGTTGATATCTGGTCTTGTGGCGTTATCCTCTTCGTTTTAACGGCTGGTTATTTACCATTCCATGATCAGAACATTATGGCAATGTACAAGAAAATTTACAAAGGCATTTTCCGGTGTCCCAAGTGGTTCTCGTCGGAGCTAAATTTATTATGTACTCGTCTTCTCAATACAAATCCGGAAACCAGAATCTCAATTCCAGAAATCATGGAAAACAAGTGGTTCAAGAAAGGTTTCAAAAAAATCAAGTTCTATTTCGAGGACGATAAGATCTGTACCAGTGTTGACGATATTGCCGTATCGGATTTTAACCAAGATGACATAGAATCAGTCTCGGATTATTCGGTATCAGAGTCGGACTTAGAGCCAGAGGTTAAAAGAAGAAGGAACGCTTCATTGCCAAGACCAGCAAGCTTGAATGCATTTGATATAATATCATTCTCTGCAGGGTTTGATCTTTCTGGTTTATTCGAGGAGAAAGGGGATGAGTCCAGGTTCGTGTCCCACGCGCCGGTGTCAGAGATTATATCAAAGTTGGAGGAAATTGCGGAGGTGGTTAGCTTTAAGGTGAGGAAGAAGGATTGCAGGGTGAGCTTGGAGGGATGGAAGGAAGGTGTGAAGGGGCCGTTGACGATTGCGGCGGAGATATTTGAGCTAACTCCGTCGTTGGTGGTGGTGGAGTTGAAGAAGAAAGCAGGTGACAAAACAGAGTATGAACAGTTTTGTAACTCTGAATTGAAACCTGCCTTGCACATGTTGATGATGAAATATGAATCAGCAACTCCTTCTTCTTCTTCAAAGACAAATTCTTCTGATGACATTCCTCAAACTGATACTGATTCATAG 1446 0.455 MADVFVSAKKKNKANLLLSRFEVGKLLGHGTFAKVYYAQNIKTKEGVAIKIIDKEKILKGGLVAHIKREIWILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEAARKYFQQLMSAVEFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVILFVLTAGYLPFHDQNIMAMYKKIYKGIFRCPKWFSSELNLLCTRLLNTNPETRISIPEIMENKWFKKGFKKIKFYFEDDKICTSVDDIAVSDFNQDDIESVSDYSVSESDLEPEVKRRRNASLPRPASLNAFDIISFSAGFDLSGLFEEKGDESRFVSHAPVSEIISKLEEIAEVVSFKVRKKDCRVSLEGWKEGVKGPLTIAAEIFELTPSLVVVELKKKAGDKTEYEQFCNSELKPALHMLMMKYESATPSSSSKTNSSDDIPQTDTDS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1417 481 FunFam Non-specific serine/threonine protein kinase 336 454 - -
Acco03g1417 481 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1417 481 Pfam NAF domain 336 392 IPR004041 GO:0007165
Acco03g1417 481 Gene3D Transferase(Phosphotransferase) domain 1 11 331 - -
Acco03g1417 481 MobiDBLite consensus disorder prediction 458 481 - -
Acco03g1417 481 ProSiteProfiles NAF domain profile. 334 358 IPR018451 GO:0007165
Acco03g1417 481 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1417 481 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 440 - -
Acco03g1417 481 FunFam Non-specific serine/threonine protein kinase 10 318 - -
Acco03g1417 481 SUPERFAMILY Protein kinase-like (PK-like) 17 323 IPR011009 -
Acco03g1417 481 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Acco03g1417 481 CDD CIPK_C 340 450 - -
Acco03g1417 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Acco03g1417 481 Gene3D Kinase associated domain 1, KA1 334 456 - -
Acco03g1417 481 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Acco03g1417 481 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1417 Acco-ChrAcco03 33106981 33108426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1417 16 481 CBL-interacting serine-threonine protein kinases AT4G18700 77.039 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco03g1417 Pkinase 1e-73 CL0016