Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1407 ATGGATCCTACTTGTGGTTTGGCTGACAAGATACGGGACCTAGTGTTGGACCTAATTTGGAAGCAGCTTCTTTATCTAGTTCACTATCACAGAAACATTGAGCACCTCAATGGACAACTTGATGATCTCAACAGTGAAAGAAGCTCCTTACAACATCGAATAGATGAGGCTACAAACAATGTAGAACGAATTGAAGAGAAAGTTCTTCATTGGTTGGGTGAAGTAGATGATCTATCAGGGAGAGTACAAAAGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGCAACATTACTTCATGTCCCAACCTGTGGCTACGCTATAAACTAAGCAAGAGAGCAGAGACAATTGCACAAGAAGCTGTTAAAATCTATGGAAAGAGAAACTTTGATAGAGTTTCATATCACGTTCCTCCCCAGCCTATGCCGGAGTTAACCAATAGAGAAAGTAACAGAGGGCTTGATTCAAGAGTGGAAATTAAGAATCATGTTATGGAGGCATTGCGGAATCCAAAATTTAATATGATAGGATTGTGTGGGCTTGGTGGTGTTGGCAAGACAACTATAGCTAAAGATGTAGAAAAGGAGGAGAAGAATCAAGAGGTATTTAAAACGGTGATCATGGCAACTGTTTCTCAAGAAATGAACATTGGGCAGATTCAAGACCAGATCATTGAGAAGCTGGGTATGCAACTCAGTGAAAGAATCGAAGATGTAAAAGCTTCACGTCTAAAAGAGAGGTTGAAGGATGAGAAAAATATGCTTCTAATATTAGATGATCTTTGGCAAGAACTTGATTTGGACAAAGTTGGAATTCCCTTTTTCAGTGTTGAAAATGATAGAAAAAAGAATGAAGGTTGCAAAATCTTGCTAACTTCAAGGGATAAAATGTTATTGTCAGATCTCATGAAATGTCAAAAAATTGTTGAAGTGGGTGTTTTGTCAGAGGATGAAGCATTGGAGTTGTTCAACAAATTTGCTGAACTTTCTACTGACTTAAGTAGTCCTGAGTTGATAACTATAGGCACTGATATTGTTCGAAAGTGTGGAGGCCTTCCGCTAGCAATTGCTACAGCTGCTAAGGCACTAAGGAACAAAGGTATTAATGAGTGGAAAGATGCCCTTGCGCGGTTGAATAATCCTTTCAGGAGAAACAACACATTAACAAGAGAGGTGGATACCATTTTGAAATTGAGCTATGATTGTCTAAGCTCATCAGAGTACAAACAAATTTTCTTGCTCTCTGCCATGTTATCTCATGATCCCTCAATTGAAGACTTGCTCATGTATTCTGTGGGGCTAGATATTCTTGATGGCATAGAAAACATGGAGGATGCTCGTGTTGGAGTCTCTGCTATTGTAAGTAAGCTAAAATCATTAAACTTATTTCTTGATGGCCTTTCTAGTCATCATGTTACAATACATGACGTCTTTCGAGATGTTGCATTACCGATTGCATCTAATGAATTACATTCATTCATACGTAGAAGGTTGAAAGAATGGCCAGATGAAAATATGCTACAAGGTTGTAAGGGAATTTGCTTACGAGAGAGTGACATTAGTGACCTTCCAGAAGAGTTGCATTGTCCAAGATTACAATTCTTTTTGCTAAACAGCACAAAACGAGATTTGAACATACCCAGCATATTTTTCAAATCTTCAAAGGAGCTGAAAGTGTTGGCATTTACTAATGTGCATTTTTCCTCATTACCATCCCTCATGTTCCTACATAAACTAAAAATGTTGTGCCTACACTCTTGTTTGCTGGACAACATAACTGAGGTTAGAAGCTTGAAGAATTTAAAAGTCCTAAGTTTTGCTTACTCTGAAATTCAACAGCTACCAATTGAATTATCAGAATTGACTTATTTACAAATGTTGAATTTATCTCATTGCTTCAATCTTAAAGAAATTCCACAGAAACTCCTATCTAGCTTAAAGAAATTGGAGGTTTTACATATGAGAAATAGCTTTCACCAATGGAAAGTTGAAGGGTATAGTGAAGCTAATGAAAATGCAAGTCTTGATGAGTTAACAGATCTGCCAATCTCTTCTCTTGATATTCATATTCCTAATATCTCTATGTTGCCAGAGAACTTGTTCTTGTATATGAATTTGAAGAGATATAAAATATCTATAGGAGAGCATTGGGAATGGGAAGACAATTATGAAACTTCAAAGATATTGAAACTTCAGCTACATAGTAGTGTCCATTTGAAGGGTGGGGTTCAAAAATTATTGGATGGAGTTGAAGATTTGTATTTATATGGATCCAATGCTCATGAAAATGTTCTTCACAGTCTTGAAGGAAGAGGATTTCCACATTTAAGGCATCTTCAGATGGATGGTAATTATGGCATTAGATCCGATGTTTTCAACTCGGCACATCATGAAGCTGCAACAAAGAATGTATCCAATAAAACTTTCAAATCACTTTTCAACAACAAGGTGTTACTTCCAAAGTTAGAAATATTGGAATTATCCAATATATTGAACTGGTTGATTCCATTGGTATGGGATGACAACCTCTCACTCAACTCATTCAACAACTTGAATGTATTGGTTGTGGAAAGATGTGGCTTTGTGAAATTGGTGCCCCTTCATGTGTTGAAATCTTTAAACAACTTGGAGGTAGTGGAAGTCATATATTGTGACATGTTGGAGATTGTATTTGATTTTGAAGATTTGAATGATTATTATAAAGAGATGGATTCATCATCAGTGGTTGTCCCACTAAAAAAGTTGAAGCTATGGAGTTTGCCAAAATTGAAGTATGTGTGGAGCAATAACTACCAAGGAAATGTCTCCTTCCCAAGTCTAAGGAGCGTAAGTGTTTATAAATGTGAAAGCCTCACAAGTATATTTCCTGCGTCTATAGCCAAAGGCATGCTTTGTGATCTTGAAGAGCTTCAAATACTTCAATGTGGTGTAGATGTGATCGTTGCAAAGGATCAAGTTTCAGAATCTACTGCTGTTACATTTGGGTTTCCTAGGCTAACTTCCCTTATACTTTCTGAACTTCCAAATTTGAGGAACTTCTATCCAAAAAAACACATAGTAGAATGGCTGAACCTTAACCAGTTATATATTTGTTGTTGTGATGAATTAGAGATATTTGAAAAAGAAGTGTCAAGTTCATCAAAAATATATGAGGAAGACAATATGCTAGACTCAAAATATCCTCTCCTATCCCTCGACAAGGTTAGTGGTAATTTGGACAGGTTGACATTGGATGGTACAGAAGTTGAGAAGATCGGAAGTGGTCAATTTCTAATGGACCACTTCCCCAAATTAAAGCTACTTCATCTATCTTTTTTGAAAAAACTTACTTTTCCATGGCTACCAGCTTGGGAGAGGTCTCCAAATTTAGAGGAGCTGAAGTTGAGTGGGCACTTTGAGAAGGAGGTTGCAGCACTTGTTCCTCGCTTCCGAAAATTGACTTTGCAGCATATTTCCATTATGAGAAGCTTGTCACCATCCTTAGTTTCTTCACCAAATCTTACACATCTTAATGTGATTGGGTATGATGGGCCCACTTTGATGACATCATCAATTGCTCGAAGCTTGGTCCATATCACGCATCTCTCAATTAGTGATTGTAGTCAAATTGAGGAAATTATAACGAAGCAAGCAGGAGAGGATGATGAGGACAAGGAAATCTTTTTCAAAAACCTTGAGTTCTTGGAACTTACTAATTTACCAATATTAAGGGGATTTTGCTGCCACAATTATACTTTCAGGTTTCCATTATTGGATAAACTTGTCATAGCAATATGTCCGAAATTCAAAAGATTCTCTCCAGGGCTTATCAATACACCATCTCTTAAAAGCGTTCAGGTGTCACAAGACAGGGGAGAAGATCCTCATGAAATTTGGGACACTGATCTAAACAAAACATTCTACCAAAAGCGGTTTATGACATCAAGAGAGGTGGTGTTAGATGAGGATGATGCTATCATGATAAGGAATGACCAATTTCCTACGGACCGTTGCCCTCAAGCGGAAATTCTTCGTATAGAAAGATTTGTTGAAGAGTGGGTAACATTTCCATATACATTGCTTGAAAGATTTCCGAAGCTGAATGAACTTCATGTGAATAAATGTTCGTTTAGGGAGATATTCCCGTCACAGGCACCATCCTCCACTTCATTTCATAATTTGACACTACTGAAGGTGTCCAATTGTCATCATCTTGTCTATTTAATGACAATTTCAACTTCCAAGAGTCTAGTGAATCTTGAAACATTGATGATATTCGACTGCAAAAAATTGGAAGAAATTATCAGAAAAGAGCCTAATGAAGATGTAAAAGAGGGAACCACATTGTTCATTGGGTTGAAAATATTAGAACTCAGGCGTCTACCAAGATTGAAAACACAAGAGGATAAAAAGGATTTCAATATTGAAGATAGATCAACAAATACTAGATGCACAAACATTTCCAAATCACTTTTCAGCCATAATAAGGTGTTACTTCCAAAATTAGAGAGATTGGAATTAATCAATGAATCAAACAATCTGATTTCATTGATATGGGATGATCAACTTTTACCCAACACATTCAACAACTTGAAAACATTGATTTTGGGATATTGTAACTTTATGAAAATGGTGCCCCTTCGTATGCTAAAATCTTTAAACAACTTGGAAAAACTAGAAGTCATATTGTGTCCCAAGTTGGAGATGGTGTTTGGTTATGAAGATTTGAATGATTATCATAAAGAGATGGATTCATCATCAGTGGATGTGCCACTGAGTCTAACACATCTTGAAGTGATAAGTTGTAATGGGCTAACCACTTTGATGACGTCATCAGCAGCTCCAAGCTTGGTCCATATCACACATCTCTCAATTAGTGATTGTGATCAAATTGAGGAAATTATAACAAAGCAGGAAGGAGAGGATGATGAGGACAAGGAAATCTTTTTCAACAAGATGAAGTTTTTGCAACTTTCTTCTTTACCAAGATTAAGGAGATTTTGCCGCCACAATTATACTTTCAGGTTTCCATTATTGGATAATTTTGTTATAGACAGATGTCCAAAATTCAAAAGATTCTCTCCAGGACTTATTAATACACCATCTCTTAAAAGTGTTCAAGTGTCACGAGATTGGGGAGAACGTGTTGAAATTTGGGACACCAACCTTGACAAAACATTCTATCAAGAGCGATATGTGACATCACGAGAGCTGGTGTTAGATGAGGATGATGCTATCATGATAAGGAATGACCAATTTCCAGTAGACTGTTGTCCTCAAGTGGAAATTCTTGGCATAGAAGGATTTGTTGATCAGTGGGTAACATTTCCATATACATTGCTTGAAAGATTTCCGGAGCTGAATGAACTTCATGTGGAGAATTGTTCCTTTGAGGAGATATTACCGTTACATGCGCCATCCTCCACTTCATTTCATAATTTGACAAAGCTAAAGGTGTCCAAATGTCATCGGCTTGTCTATCTAGTAACATGTTCGACTGTCAAGAGTTTGGTGAATCTTGAAATATTGGAGATGGATGACTGTGAAAAATTGGAAGAAATTGTAAGGAATGAGACTAATGAAGATGTAGAACGGAGAATCACATTATTCAATGGGTTGAGAATATTAAAACTCACTCGTCTACCAAAATTGAAAACACAAGAGGATAAAAAGGATTTCAACATTGAAGACAGAGCAACAAATATCAGATGCACAAGCATTTCCAGATCACTTTTCAGCCACAATAAGGTGTTACTTCCAAAGTTAGAGAGATTGGAATTATCCTATTTATTAAACATGTTGATTTCATTGATATGGGATGATCAACTTTTACTCAACTCATTCAACAACTTGAAAACATTGATTTTGGGAGACTGTGACTTTATGAAAATGGTGCCCCTTTTTGTGCTCAAATGTTTAAACAACTTGGAAAAATTGGAAGTGAGAAGGTGTCAGAAGTTGGAGATGGTGTTTGGTTATGAAGATTTGGATGCTTATCATAAAGAGATGGAGTCATCATCAGTGGTTGTGCCGCTGAGTCTAACACATCTTGAAGTGGAAGTGTGTCATGGGCTGACCACTTTGATGATGTCATTAGCAGCTCCAAGCTTGGTCCACATCAAACATCTCTCAATTAGTGATTGTGATCAAATTGAGGAAATTATAACAAAGCAGGAAGGAGAGGATGATGAGGACAAGGAAATCTTTTTCAACAATATGAAGTTTTTGGAACTTGCTTATTTACCAAGATTGAAGAGATTTTGTGGCAACAATTATACTTTTAGATTTTCATTATTGAAACATGTAACTATAACAGAGTGTCCTCAGCTCACAATATTTTGTCTAGGAGCCATTCATGCCCCGAGGCTTCACAGCATTAATGTGGATAAATATAGGGCTCATAAACGTATCAAGATGGCAGATCTTAACACCACCATCCAACATCTATTTAGTTTTGAAGAGGTCATTTCCACAACCCAGAGCATGGTGATAAATGGGAAGAATGTCACAAGGATAGTGGATGTATTTCCAAAAGTCAGAGCTCTTTATGTAGAAAGCTTCCCGGATGAAGGGATCACCTTTCCCTATAGCTCCCTTGAAAAATTCCCTAAGTTGCATACGCTTTATGTGGAGTATTGTTCCTTTGAGGAGATATTCCCATTACAAGACCAGATTATTGATTCTATGGGGAAAATCTCACCATTTCAGGTATTATACATTGCCTATATGGATAAGCTCAAGAGCATATGGAAGGATGATTCTCAACTACCACCTATTCATCAAAATCTAGAAGTCCTTGAAGTCAAAAGTTGTTGTAGCTTGGTTAAGTTAGCACCATCCTCTGCTTCATTTCAAAATTTGGGGAGCCTGTCTGTATCTACATGTCATCAGCTCATCCATTTAGTGACAACTTCAACTGCCAAAAGCTTAGTGAGTCTTTGGCAGTTGCAAATAAATGATTGCAAAAGGATGGAGGAAATTATAATGAATGACACCAATGAAGATGTACAAGGTGGAATCACGTTCAACGGATTGAATAGGATCAAAATTACTGATATGCCAAGCTTGAAGATGTTTTCTCCACAAAGTCACACCTTTGAATTCCCAATATTAGAAGATATAGAAATAAGTGGATGCCCTGAATTGAAGAAGTTTTGTCGAGGAGTGTTGAAAACACCAAAGTTGTCTAAAGTGAAAATAGAAGAGCATGGCATGGAATGGAAGGATGAAGAAGACCTTAACAAAACAATGGAAGGGCTATCTCAGCAAAGGATAGCATTAATATATAGAAGGATAACTTCATCGTCCCTGTTATCATCTTCAGGTGTTGGTGATGATGTTGACACTTGA 7329 0.37 MDPTCGLADKIRDLVLDLIWKQLLYLVHYHRNIEHLNGQLDDLNSERSSLQHRIDEATNNVERIEEKVLHWLGEVDDLSGRVQKFHEEESQAKTECNITSCPNLWLRYKLSKRAETIAQEAVKIYGKRNFDRVSYHVPPQPMPELTNRESNRGLDSRVEIKNHVMEALRNPKFNMIGLCGLGGVGKTTIAKDVEKEEKNQEVFKTVIMATVSQEMNIGQIQDQIIEKLGMQLSERIEDVKASRLKERLKDEKNMLLILDDLWQELDLDKVGIPFFSVENDRKKNEGCKILLTSRDKMLLSDLMKCQKIVEVGVLSEDEALELFNKFAELSTDLSSPELITIGTDIVRKCGGLPLAIATAAKALRNKGINEWKDALARLNNPFRRNNTLTREVDTILKLSYDCLSSSEYKQIFLLSAMLSHDPSIEDLLMYSVGLDILDGIENMEDARVGVSAIVSKLKSLNLFLDGLSSHHVTIHDVFRDVALPIASNELHSFIRRRLKEWPDENMLQGCKGICLRESDISDLPEELHCPRLQFFLLNSTKRDLNIPSIFFKSSKELKVLAFTNVHFSSLPSLMFLHKLKMLCLHSCLLDNITEVRSLKNLKVLSFAYSEIQQLPIELSELTYLQMLNLSHCFNLKEIPQKLLSSLKKLEVLHMRNSFHQWKVEGYSEANENASLDELTDLPISSLDIHIPNISMLPENLFLYMNLKRYKISIGEHWEWEDNYETSKILKLQLHSSVHLKGGVQKLLDGVEDLYLYGSNAHENVLHSLEGRGFPHLRHLQMDGNYGIRSDVFNSAHHEAATKNVSNKTFKSLFNNKVLLPKLEILELSNILNWLIPLVWDDNLSLNSFNNLNVLVVERCGFVKLVPLHVLKSLNNLEVVEVIYCDMLEIVFDFEDLNDYYKEMDSSSVVVPLKKLKLWSLPKLKYVWSNNYQGNVSFPSLRSVSVYKCESLTSIFPASIAKGMLCDLEELQILQCGVDVIVAKDQVSESTAVTFGFPRLTSLILSELPNLRNFYPKKHIVEWLNLNQLYICCCDELEIFEKEVSSSSKIYEEDNMLDSKYPLLSLDKVSGNLDRLTLDGTEVEKIGSGQFLMDHFPKLKLLHLSFLKKLTFPWLPAWERSPNLEELKLSGHFEKEVAALVPRFRKLTLQHISIMRSLSPSLVSSPNLTHLNVIGYDGPTLMTSSIARSLVHITHLSISDCSQIEEIITKQAGEDDEDKEIFFKNLEFLELTNLPILRGFCCHNYTFRFPLLDKLVIAICPKFKRFSPGLINTPSLKSVQVSQDRGEDPHEIWDTDLNKTFYQKRFMTSREVVLDEDDAIMIRNDQFPTDRCPQAEILRIERFVEEWVTFPYTLLERFPKLNELHVNKCSFREIFPSQAPSSTSFHNLTLLKVSNCHHLVYLMTISTSKSLVNLETLMIFDCKKLEEIIRKEPNEDVKEGTTLFIGLKILELRRLPRLKTQEDKKDFNIEDRSTNTRCTNISKSLFSHNKVLLPKLERLELINESNNLISLIWDDQLLPNTFNNLKTLILGYCNFMKMVPLRMLKSLNNLEKLEVILCPKLEMVFGYEDLNDYHKEMDSSSVDVPLSLTHLEVISCNGLTTLMTSSAAPSLVHITHLSISDCDQIEEIITKQEGEDDEDKEIFFNKMKFLQLSSLPRLRRFCRHNYTFRFPLLDNFVIDRCPKFKRFSPGLINTPSLKSVQVSRDWGERVEIWDTNLDKTFYQERYVTSRELVLDEDDAIMIRNDQFPVDCCPQVEILGIEGFVDQWVTFPYTLLERFPELNELHVENCSFEEILPLHAPSSTSFHNLTKLKVSKCHRLVYLVTCSTVKSLVNLEILEMDDCEKLEEIVRNETNEDVERRITLFNGLRILKLTRLPKLKTQEDKKDFNIEDRATNIRCTSISRSLFSHNKVLLPKLERLELSYLLNMLISLIWDDQLLLNSFNNLKTLILGDCDFMKMVPLFVLKCLNNLEKLEVRRCQKLEMVFGYEDLDAYHKEMESSSVVVPLSLTHLEVEVCHGLTTLMMSLAAPSLVHIKHLSISDCDQIEEIITKQEGEDDEDKEIFFNNMKFLELAYLPRLKRFCGNNYTFRFSLLKHVTITECPQLTIFCLGAIHAPRLHSINVDKYRAHKRIKMADLNTTIQHLFSFEEVISTTQSMVINGKNVTRIVDVFPKVRALYVESFPDEGITFPYSSLEKFPKLHTLYVEYCSFEEIFPLQDQIIDSMGKISPFQVLYIAYMDKLKSIWKDDSQLPPIHQNLEVLEVKSCCSLVKLAPSSASFQNLGSLSVSTCHQLIHLVTTSTAKSLVSLWQLQINDCKRMEEIIMNDTNEDVQGGITFNGLNRIKITDMPSLKMFSPQSHTFEFPILEDIEISGCPELKKFCRGVLKTPKLSKVKIEEHGMEWKDEEDLNKTMEGLSQQRIALIYRRITSSSLLSSSGVGDDVDT 2442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 468 688 IPR032675 -
Acco03g1407 2442 SUPERFAMILY L domain-like 474 1274 - -
Acco03g1407 2442 Coils Coil 26 74 - -
Acco03g1407 2442 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 2152 2389 - -
Acco03g1407 2442 SUPERFAMILY RNI-like 1584 1848 - -
Acco03g1407 2442 SUPERFAMILY RNI-like 805 1131 - -
Acco03g1407 2442 Gene3D - 313 404 IPR042197 -
Acco03g1407 2442 FunFam Probable disease resistance protein At1g61300 139 306 - -
Acco03g1407 2442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 413 IPR027417 -
Acco03g1407 2442 PRINTS Disease resistance protein signature 175 190 - -
Acco03g1407 2442 PRINTS Disease resistance protein signature 619 635 - -
Acco03g1407 2442 PRINTS Disease resistance protein signature 248 262 - -
Acco03g1407 2442 PRINTS Disease resistance protein signature 349 363 - -
Acco03g1407 2442 SUPERFAMILY RNI-like 1350 1629 - -
Acco03g1407 2442 SUPERFAMILY RNI-like 2005 2240 - -
Acco03g1407 2442 SMART AAA_5 172 314 IPR003593 GO:0016887
Acco03g1407 2442 Gene3D - 135 311 IPR027417 -
Acco03g1407 2442 Pfam NB-ARC domain 161 401 IPR002182 GO:0043531
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 720 1049 IPR032675 -
Acco03g1407 2442 SUPERFAMILY RNI-like 2167 2393 - -
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 1887 2157 IPR032675 -
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 1742 1886 IPR032675 -
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 1568 1715 IPR032675 -
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 1053 1288 IPR032675 -
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 2158 2409 IPR032675 -
Acco03g1407 2442 Gene3D Ribonuclease Inhibitor 1324 1467 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1407 Acco-ChrAcco03 32911715 32925003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1407 176 501 WRKY Transcription Factor Family AT5G45050 25.826 6.59e-10 63.2