Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1376 ATGCATTGTAGAAATCCCCCACCACATCACCCATTTATCAGCGCCACAAGAATTTTCAACGGCGATGAAGATGATCATAATCCGTTATTCCAAGTAATCAAAATTCGCCAGACTCGATTCATTATTCACGGCTTGACTAGGAAAAATAACATTGACTTGGAGTCAATGCTTTGTATCAATCCTCTGCCACCACTCGTTTGTGTAAGCAATTCAATTATGAGACAGCTTGACATAAACACAAAACTTGTGGGTCCCTTCAGAGTCAAAGATAACTCCCCAGCAATTAATGAAATGCGTGTGGATCTATACTGTGGAAGTGAAAGGTTTGAAATTTGGTCTCATTCCCATTTTGCGTGGAAATTTCCAGTAAATAGGAACGACGGTTCCTCCAAAATTCCAGAAGTAACAAGGTGCGGCGCTGATGGACCAGAAATTCGATTCCCCTTTAGGCTCAAAGGAAAGCAGCCACAATGGTGTGCTTATAATTCAAGCTTTGATCTTTTCTGTTCTGAAACAAACACCACAGTTCTCGAGCTGCCATTCTCTGTCAAGCTTATCGTACAAGTCCTCGACTATAAATCACAAGTCATTACTGTGTCTGACCCTGATGGATGCCTTGCTCAACTCAATTTATATGCATCTCCTTTTCGGTCAAATGATTATTCTGAATCAAGCCGATATGCGCTATTCAATTGCTTAGGACCATCTTGTAGAAATTCAGAAATTGGTCAATGGGGGAACTTTTCTTGCCTTGATGTTCCTGGCTATGAAGTTTTAGCTATACCATATGCAGTGAAAATTATGAACTATCCTCTTCTATCATGCACAAGAGTTCATGGCTATGTGTCAGTCCCTAATTCATTTTACAATTACATTTTCAATAACCTCATATATCTGTATTGGACAGAGCCAGATTGCAGGAAGTGTGAAGAAGATGGAGGCCAGTGTAAATTGAGAGAAAACAAAGCTGAACGTGAACCTGAATGTTTCCAAAGGCCCCATAAAGGTGAAATCCTAGGCCCGTTTCTGCTCATATTTGTTGGCTTTATTGTTTATTGGGTCCATGCAGCTTGCGTGGAGAGGCAAGATGTCACAGAAGAAAATGGCGACCAAGTTTACTACCCACGATGGATTTATAATCTTCTAGAGAACAACGAAGACATACAAATTCATATAGAAGGAGAGGAGGACACTAAAATTGCAAGGAAGCTATCTATTGTTGGACTTTGGTGCATTCAATGGCATCCGGCAAATCGTCCAACCATGAAAAATGTGGTTCAAATGTTGGAAGGGGTTGACGGAAAGCTAATTATGCCTCCCAATCCTTTTGGTTCTACACACGCAACCAGAACAAGGGCTATTAGTGGAGTAAGACGATTGAAACCAGAGCTTTCTATTATTTCTAAGATAGAGTCAAGTTGA 1422 0.4058 MHCRNPPPHHPFISATRIFNGDEDDHNPLFQVIKIRQTRFIIHGLTRKNNIDLESMLCINPLPPLVCVSNSIMRQLDINTKLVGPFRVKDNSPAINEMRVDLYCGSERFEIWSHSHFAWKFPVNRNDGSSKIPEVTRCGADGPEIRFPFRLKGKQPQWCAYNSSFDLFCSETNTTVLELPFSVKLIVQVLDYKSQVITVSDPDGCLAQLNLYASPFRSNDYSESSRYALFNCLGPSCRNSEIGQWGNFSCLDVPGYEVLAIPYAVKIMNYPLLSCTRVHGYVSVPNSFYNYIFNNLIYLYWTEPDCRKCEEDGGQCKLRENKAEREPECFQRPHKGEILGPFLLIFVGFIVYWVHAACVERQDVTEENGDQVYYPRWIYNLLENNEDIQIHIEGEEDTKIARKLSIVGLWCIQWHPANRPTMKNVVQMLEGVDGKLIMPPNPFGSTHATRTRAISGVRRLKPELSIISKIESS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1376 473 Pfam Wall-associated receptor kinase galacturonan-binding 137 201 IPR025287 GO:0030247
Acco03g1376 473 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 132 354 IPR046948 -
Acco03g1376 473 Gene3D Transferase(Phosphotransferase) domain 1 347 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1376 Acco-ChrAcco03 31912897 31915402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1376 136 330 C3H Transcription Factor Family AT2G46495 29.858 1.91e-18 84.7