Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1365 ATGCCTTCTTCTTCTTCTTCTTGGACTGTATCTTCCATAAACCTTCAATTCTTCACTCGAATCAGACGCTTTCTTCAATCCAAATCTTCTCGGAAGCGCAACCACGGGTCCGATCAATTTCACCTATCAAAATCCAAATCAGAACACATCGAGAAGAAGAACGAGAAGGCGGCGGAGGTTGAAAAGCCTGAAACGATCAAAGTTCTGCAGAAACAGAGTGAGAGTATTGAGGAGAAGGAGAAGGACGATGAAGAGTGTTGTGAGATTTTGTTGCAGAGGTCCGTCAAGAAGCTTCACTTTGGTGATTGGGAGGAGAAGGAGATTGCAGCAAAAGAGATTGAAACTATGGCGAAACGCGATATCAGGGCTCGCAAGTTGTTTATGGAGCTCGGCGTCGTGCCGGTGCTCGTCTCTATGGTGGCTTCTGATGCATCCAGCCGCCGGAGTTCTGCCGTCACGGCGTTAATTCTGCTCGCAGATGGAAGCTTCACGAACAAGGCCATGATAGTGGAGGCAGGAACATTATCCAAGTTACCTAAGACGATTGAACTTATGGACCAATCAACAAGAAGTCAAATTGCAGAGTTGCTTCTATCACTATCATCTTTAGCAACCACACAATTCCCTTTTGCATCACTGGACTTTCTCCCATTTCTCAGAGACATTCTTCAGTCAAACTCAACCTTTGACACAAAACAGTCATGTCTAGGAGCCATATACAATCTCTCAACTGTCTTAGAGAATGCAGGGCCTTTGGTTTCTTGTGGGTTTGTCCCTATTCTTCTAGAACTTTCCTCAGAGAAACAAGTTTCAGAGAAGGCACTGGCGTCTCTTGGTAGCTTAATTGTTACCTTGATGGGGAAGAAAGCAGTGGAAGAAAGCTCAATGGTACCAGAGAGCTTGATAGAGATTTTGTCATGGGAAGATAAGCCAAAATGTCAGGAGATTTCTGTTTATATTTTGATGATTCTTGCTCATCAAAGCTCATCACAGAGACAGAAAATGGCAAAAGCAGGGATTGTTCATGTGCTTCTTGAAGTTGTTTTATTGGGAAGCACTTTGGCACAGAAGCGAGCTTCAAAACTGTTGCAATGGTTTAAGGATGAGAGGCAAGTGAGAATGGGCCCACATTCGGGCCCGCAAACATCAAGGACTGTCATGTCCATGGGTTCACCTGTGAATCAAATGGAAGCAAAAGAAGGGAAGAGAATGATGAAGAGTTTGGTCAAAGAGAGTTTATATAGGAACATGGAAACAATTACAGAGAGGGCAAATATTGCTGCCGATGCTGCAGAATCTTCTTCTAAGTTCAAGTCTTTAATAATCAGTACAAGTTCCAAGAGTTTGCCTTACTGA 1356 0.4366 MPSSSSSWTVSSINLQFFTRIRRFLQSKSSRKRNHGSDQFHLSKSKSEHIEKKNEKAAEVEKPETIKVLQKQSESIEEKEKDDEECCEILLQRSVKKLHFGDWEEKEIAAKEIETMAKRDIRARKLFMELGVVPVLVSMVASDASSRRSSAVTALILLADGSFTNKAMIVEAGTLSKLPKTIELMDQSTRSQIAELLLSLSSLATTQFPFASLDFLPFLRDILQSNSTFDTKQSCLGAIYNLSTVLENAGPLVSCGFVPILLELSSEKQVSEKALASLGSLIVTLMGKKAVEESSMVPESLIEILSWEDKPKCQEISVYILMILAHQSSSQRQKMAKAGIVHVLLEVVLLGSTLAQKRASKLLQWFKDERQVRMGPHSGPQTSRTVMSMGSPVNQMEAKEGKRMMKSLVKESLYRNMETITERANIAADAAESSSKFKSLIISTSSKSLPY 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1365 451 SUPERFAMILY ARM repeat 95 363 IPR016024 -
Acco03g1365 451 Gene3D - 25 374 IPR011989 -
Acco03g1365 451 MobiDBLite consensus disorder prediction 31 61 - -
Acco03g1365 451 MobiDBLite consensus disorder prediction 28 61 - -
Acco03g1365 451 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1365 Acco-ChrAcco03 31769432 31773531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1365 97 364 U-box Gene Family AT3G46510 27.407 3.37e-19 88.6