Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1318 ATGCACCAGTTGGAAGCTTGTAAAAGGGATGTTGAATTGAGGCCTCAACAAGGGGCAGAGGAAAGACAAGCATGTAACATATGGCTTGATCGAGTTGACAAGGTAGAGAGAGAAGTTAGCAGTCTCATGGATGAAAATGGCCCACATAGACCAACAGAAGGATGCAATGTCATTTGTTCAAGAATCAAGTTTGGGAAACTCATAGAGAAGAAGATCAGAGATATTCAAGAACTTCTACAGAGTGTTCCCTGTGGAGAGGAATCAAATGCTATTGCTATGAACGAGAGAGGTGATGTTTTGTCGGCAACACCGGTGGAGAAACGTGGACCACATGGTCAAATCTTTGAAGAGATTTTGGAATTCCTACATGATGAGAATACTAAAAGGATCGGTGTTTGGGGGATGGGAGGAGCAGGTAAAACAACTATCATGTCAAAGATTTACGATTTGCTCGTAAGAGGAAATAGTCAATTTAATTGCATTTGGGTGGAAGCGTCAAAGGATCAAAAGAAGGTGCAACAGGATATAGCTAAGAAGTTGGGCTTGACTTTTCAAGAAACTGATGATGGAAGAGCAAGAGCTACAAAATTGTTACAAGCTTTTAATAGGAGGAAGAAATATGTACTGATTTTGGATGATGTTTTGGAACCGTTCTCTATTGAAGAAGTTGGAATTCCCGTGCCAGCAGCACGCAATGGTTGTAAATTAGTGATAATAACTCCAAGCCCTGAGGTGTGCAGAGAGATGGGAATAGACAAGGAAGTCGAAGTGAAAGTTCTTGATGAGGAAGAAGCAATGAATCTCTTCAAGGACAAAGTTAGGGAACTCGAGCGATCTGATCCCAGAGTACAATCAATTGCAATGGAAGTGGCAAAAGAGTGTGAGGGTTTGCCTCTAGCTATTGTTACGGTTGGAGGTGCATTGAGAAACACAATTGATAAAAGAGAGTGGGAGAATGTATTAAAAGAGTTAAGAAGAATTTCAAGTTCTAATGGATGCAACTTTGACGAAGTAGTGCACTCTCGTTTGAAGTTGAGCTACTCAAAACTAAAGGATGATGCAATGCGACGTTGCTTTCTGTTTTGTGCCTTATACCCAAAAGGTCATATAATGAATGCGGATGAATTGATTAATTATTGGGCATGGGAAGAGTTATTGGGTGCTGTAAGCATGCCTGCGATGAAACGAAAGGGGGAAATAATTATAGATGAATTAATATCTTCTTGGTTGTTGGAATCAAAAATTGAGAATGGAGCGAGATGTGTGAAAATGCATGATTTGATAAGAGATATGGCTGTCAAAATCATTAGTACAGATCCAAGGTGCATTGTGAATGCTGGCATCGGACAAGACAGACCACCAGCGCTTGATGAATGGAAAGATGTTCAATGGGTATCACTGATGAGAAATGATCTGAAAGCCATAGACTTGAGTCCAATGTGTCCTAGACTCACTTCTTTGCTGCTTCAACATAACTCATTTGAAAATAAAATACTGGATAACTTCTTTGACAACATGCCAGGGCTAAAAGTTCTTGATCTTTCCTATACTTGGATTAGTTGTCTGCCTATGTCTCTTTCAAATTTGAAGAATCTATGTGCCTTGATATTGAGCCACTGCCGGAATCTTGTTGAAGTGCCATCTTTAGCAAGGCTCACTCAGTTGAAGTACATAGATTTTTCATTTTCCAGAAAATTAACACGACTTCCAGAAGGGATGGAACAATTGACCAAATTGAGACACCTGGATTTCTCCTTCACATTAGTCCAAGACTTAAAAGATGGAGTCTTATCCAATTTTACTTTTTTGGAGGAGTTGTTGATTATTGGTTCACCTATGATTGGGGCATTATCTGAGGATACAAAATACCCAGTTAGAGTTGAAGAAATCGTATCCTGTCATAAGTTGTCTCTTGTACACGTGCAACTACATGGCATAGCAGCGTATCAAAACCTTGTCAAATGTCCCACTTTTTCTCAATTGAAGGAGTTCAAACTTGTCGTTGGGTATGAACTTGAAAGTATTCCAGAATTATTTGAGAAAACTATTTTAGCAATAGATATGTATGGAGCAGAGAAGCTTTCAGAAGAGGAGATTACTGAATTTATTCCACGAAACGTTATGCAGTTAGAAATTCAAAATTGTCTTGATATGATCAAACGCTTGTCTTTACACTTACGTGGTGCAATGTGCTTGAAGACTTGCACTATAAGAACGTGTTTGGGGATGGAATGCATTCTGGAATCTGAGGAGAACAATTTGTCGCTGCTAGAGAGAATGAATCTATACAAAATTGTCAAGTTTGAGGATGATCTGCGGGAAGGTTGTGAAACCAAGAACTCTAATGAACTTGAAGAGTGTTCATGTGGAAAGTTGTGA 2379 0.393 MHQLEACKRDVELRPQQGAEERQACNIWLDRVDKVEREVSSLMDENGPHRPTEGCNVICSRIKFGKLIEKKIRDIQELLQSVPCGEESNAIAMNERGDVLSATPVEKRGPHGQIFEEILEFLHDENTKRIGVWGMGGAGKTTIMSKIYDLLVRGNSQFNCIWVEASKDQKKVQQDIAKKLGLTFQETDDGRARATKLLQAFNRRKKYVLILDDVLEPFSIEEVGIPVPAARNGCKLVIITPSPEVCREMGIDKEVEVKVLDEEEAMNLFKDKVRELERSDPRVQSIAMEVAKECEGLPLAIVTVGGALRNTIDKREWENVLKELRRISSSNGCNFDEVVHSRLKLSYSKLKDDAMRRCFLFCALYPKGHIMNADELINYWAWEELLGAVSMPAMKRKGEIIIDELISSWLLESKIENGARCVKMHDLIRDMAVKIISTDPRCIVNAGIGQDRPPALDEWKDVQWVSLMRNDLKAIDLSPMCPRLTSLLLQHNSFENKILDNFFDNMPGLKVLDLSYTWISCLPMSLSNLKNLCALILSHCRNLVEVPSLARLTQLKYIDFSFSRKLTRLPEGMEQLTKLRHLDFSFTLVQDLKDGVLSNFTFLEELLIIGSPMIGALSEDTKYPVRVEEIVSCHKLSLVHVQLHGIAAYQNLVKCPTFSQLKEFKLVVGYELESIPELFEKTILAIDMYGAEKLSEEEITEFIPRNVMQLEIQNCLDMIKRLSLHLRGAMCLKTCTIRTCLGMECILESEENNLSLLERMNLYKIVKFEDDLREGCETKNSNELEECSCGKL 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1318 792 Gene3D - 347 434 IPR036388 -
Acco03g1318 792 FunFam Probable disease resistance protein At1g63360 347 434 - -
Acco03g1318 792 FunFam Probable disease resistance protein At1g61300 102 254 - -
Acco03g1318 792 Coils Coil 259 279 - -
Acco03g1318 792 Gene3D - 106 259 IPR027417 -
Acco03g1318 792 Pfam NB-ARC domain 115 348 IPR002182 GO:0043531
Acco03g1318 792 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 14 764 - -
Acco03g1318 792 SUPERFAMILY L domain-like 423 763 - -
Acco03g1318 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 362 IPR027417 -
Acco03g1318 792 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Acco03g1318 792 PRINTS Disease resistance protein signature 294 308 - -
Acco03g1318 792 PRINTS Disease resistance protein signature 129 144 - -
Acco03g1318 792 PRINTS Disease resistance protein signature 527 543 - -
Acco03g1318 792 PRINTS Disease resistance protein signature 201 215 - -
Acco03g1318 792 Gene3D - 260 346 IPR042197 -
Acco03g1318 792 Gene3D Ribonuclease Inhibitor 443 683 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1318 Acco-ChrAcco03 30710229 30712607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1318 130 441 WRKY Transcription Factor Family AT5G45050 23.323 2.21e-11 65.9