Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1316 ATGACTATTCCTGAAGCACTTTCAAGATTTTGGCTATTCTTTCTTCTGCTCATGTCTTCATTTTTCTTTCATTCCTATGGAGATGGGTACACCAAAGTTATACGCATTGGCGCAATTATTGACTTTAACTCTCGTATTGGTAAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAAATATAACAGCACGTCAAAGACTCACAAGCTGGCTCTTTATTTCAGAAACGCCCCAGAGGAAGCCTTCAGAGCCGTCTCTCTGGCTGAAGAGTTGATTGAAATGCAGAAAGTAGAGGTCATTATGGGGATGCATACATGGCAAGAAGCAGCTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCAGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCAAACAATGTCACTGCACATGTAAAATGCATTGCAGATATAGTGAATGCTTTTAGTTGGCAGAGAGTCGTAGTAGTTTATGAAGAAGATGGCTATGTTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACATTGGTTCACTAATTGAACACCGTTTAGCGCTTCCACCAATTTCTTTACTTCCGGATGTAGGAGAGCTAATCAATGAAGAGCTAAATAAGTTGGTAAACAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTAATTTCCTTGACTCAGTGGATAAGTCTGTCATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGTAGTGAGTATCAAGATTTTCAAGCTCAGTTCCGGAAAAAATTCCGTGCAAATAATCCTGAAGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTAGTCATTCAAGCAGTAGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATATTGTCTAGCAGTTTCAATGGTTTGAGTGGGAAAATTCATTTTCAAGAAGGTCAGCTCTTGCAGAATCCTATCCTAAGGACAGTTAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTTCCCACAGGAAAAAGAGTAGAAAATGCTACTGCTAACACACAACGTTTGGTTGGTGTATTGCAATGGCCAGGGAATTTGGAGAGAACTCCTAAAGGTTGGAATATGCCTGTTAAGAGAAACCCCATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGAATATGGAAAAAGTCCAGATCAGAATAAATATAGAGGATTCTGTATTGAGGTTTTCAACAAGGTGGTTGAGCTCTTGGGATATGATCTACCCTATGAGTTTCATCCCCTCAACGTAACTTATCCTGATCTGGTTCAACTTGTGTATAACAAGACTTATGATGCCGTGGTTGGTGACATGACCCTACTAGCAGAGAGACTGCAATATGTAGATTTTACTGTGCCGTATGCAGAATCAGGATTGTCCATGGTAGTTCCAGTGAAGTCTCAAGAGTCAACATGGATGTTTCTAAAGCCATTCACCTGGCAAATGTGGGCGGTAACTGGTGCAATGTTGATTTACACTGTGTTAGTAGTTTGGTACCTTGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTGGAAGAGACAATTCAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCATAAGGAGCAAGTGCATAGCAACTTATCTCGAGTGGTGATGGCAGTGTGGCTTCTTCTAGTTATGGTTCTGAGCTCAAGCTACACAGCTAGCCTCTCTTCAATATTAACAGTTCAACAACTTCAGCCAAACGTCACAAGCATCGAGTGGCTGAAGAAGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAGGTTCAAGCCAGAAAACATCATCAATATAAACAGTGAATACAACTATGATGGTGTATTCAAAAACAAGTCAATAACAGCAGCTTTTCTCGAACTCCCTTATGAAAAAGTATACATAAGTACTTACTGCAAGGGATATTCTGGCTCCACACCAACCACCAGATTTGGAGGCCTAGGCTTTATGTTCCAAAAAGGCTCCCCAATGGCCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGGAGGGAGAACTAACCAACTTGGAAGCGCAATCCTTATATCACTCAGACGCATGCACCAACAACTCAAGCTCCAACGATCAACAAAGTCTGAAGCTTGAAAGTTTCTGGGCTCTCTTTGTCATTTCTGGGGTCACATCTACTATCTGTTTATTATTTTCTATCATTCGGTCGCAAGGATTTTGTCAGCTAACTCAAAATATGACTCAAGAAGGCAATGGTCTCACAAGTTATATAACAGCTTGGATAAGAACACTTGAATTAGCTAAGCGGATTTATAGCAAAAAGCTTGCTCAGGAAACTCACTTGTACAGGCCTAACATTGGGACACAACAAGATGTAACTGACTGTTCTTCCAGATGGGATTATGTCAGCACCACGGATTCTCATATGCATCAACAAGATACTGCACCCCCAGCATCAACAGTCGTTGTGTTTTCTTCACCACCACCAGAGACACAAATGGAAACTTTGGATAATAGATAA 2817 0.4072 MTIPEALSRFWLFFLLLMSSFFFHSYGDGYTKVIRIGAIIDFNSRIGKEQQIAMEIGAQKYNSTSKTHKLALYFRNAPEEAFRAVSLAEELIEMQKVEVIMGMHTWQEAALVAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHVKCIADIVNAFSWQRVVVVYEEDGYVGGDYGMLSLLSEALQDIGSLIEHRLALPPISLLPDVGELINEELNKLVNKTQSRVFIVLHSSLEMVTHLFREGSKMGLVDKDSAWIISESITNFLDSVDKSVISSYMGGSLGIKMHYSEKSSEYQDFQAQFRKKFRANNPEEDNSNPGFYALQAYDSIKVVIQAVERMARDTSSSPQALLREILSSSFNGLSGKIHFQEGQLLQNPILRTVNVVGKSYKEIDFWTQENGFTTSLPTGKRVENATANTQRLVGVLQWPGNLERTPKGWNMPVKRNPMKIAVPGRTSFSKFVKVEYGKSPDQNKYRGFCIEVFNKVVELLGYDLPYEFHPLNVTYPDLVQLVYNKTYDAVVGDMTLLAERLQYVDFTVPYAESGLSMVVPVKSQESTWMFLKPFTWQMWAVTGAMLIYTVLVVWYLERVPNPEFQGNWKRQFSTALWFTFSSLFFAHKEQVHSNLSRVVMAVWLLLVMVLSSSYTASLSSILTVQQLQPNVTSIEWLKKNNMKIGCDGDSFVRTYLEKVERFKPENIININSEYNYDGVFKNKSITAAFLELPYEKVYISTYCKGYSGSTPTTRFGGLGFMFQKGSPMARDFSKAILQLSEEGELTNLEAQSLYHSDACTNNSSSNDQQSLKLESFWALFVISGVTSTICLLFSIIRSQGFCQLTQNMTQEGNGLTSYITAWIRTLELAKRIYSKKLAQETHLYRPNIGTQQDVTDCSSRWDYVSTTDSHMHQQDTAPPASTVVVFSSPPPETQMETLDNR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1316 938 Gene3D - 447 563 - -
Acco03g1316 938 FunFam Glutamate receptor 153 324 - -
Acco03g1316 938 Pfam Ligand-gated ion channel 788 822 IPR001320 GO:0015276|GO:0016020
Acco03g1316 938 SMART GluR_14 456 792 IPR001320 GO:0015276|GO:0016020
Acco03g1316 938 FunFam Glutamate receptor 450 564 - -
Acco03g1316 938 Pfam Receptor family ligand binding region 60 379 IPR001828 -
Acco03g1316 938 CDD GluR_Plant 453 786 - -
Acco03g1316 938 Pfam Bacterial extracellular solute-binding proteins, family 3 479 787 IPR001638 -
Acco03g1316 938 SUPERFAMILY Periplasmic binding protein-like II 431 786 - -
Acco03g1316 938 Gene3D - 564 702 - -
Acco03g1316 938 Gene3D - 149 407 - -
Acco03g1316 938 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 834 IPR015683 -
Acco03g1316 938 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Acco03g1316 938 SUPERFAMILY Periplasmic binding protein-like I 31 446 IPR028082 -
Acco03g1316 938 FunFam Glutamate receptor 564 702 - -
Acco03g1316 938 PIRSF IGluLR_plant 5 920 IPR017103 -
Acco03g1316 938 Gene3D - 36 384 - -
Acco03g1316 938 MobiDBLite consensus disorder prediction 907 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1316 Acco-ChrAcco03 30701485 30705774 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1316 10 829 Ion Channels AT2G29120 32.706 1.18e-141 444