Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1314 ATGACTATTCCTGAAGCGCTTTCAAGATTTTGGCTATTCTTTCTTCTGCTCATCTCTTCTTTTTGCTTTCATTCCTATGGGGATGAGTACACCAAAGTTATACGCATTGGTGCAATTATTGATGTCAACTCTCGAATTGGTCAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAAATATAACAGCACGTCAAAGACTCACAAGCTGGCTCTATATTTCAGAAACACCTCTGAGGAAGCCTTCAGAACCGTCTCTCTTGCTGAAGAGTTGATTGAAATGCAGAAAGTAGAAGTCATCATAGGTATGCATACATGGCAAGAAGCAGCTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCAGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCACATGTAAAATGCATTGCAGATATAGTGAATGCTTTTAGTTGGCAAAGAGTCGTAGTAGTTTATGAAGAAGATGGCCATGCTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGACGCCCTTCAAGACATTGGTTCACTAATTGAACACCGTTTAGCGCTTCCACCAATTTCTTTTCTGCCGGATGTAGGAGAGCTAATCAATGAAGAGCTAAATAAGTTGGTAAACAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTCGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTGATTCGCTTGACTCAGTGGATAAGTCTGTCATTTCCTCCTATATGGGCGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGCAGTGAGTATCAAGATTTTCAAGCTCAGTTCCGGAAAAAGTTTCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAGGCGTATGATAGCATCAAAGTTGTCATTCAAGCCGTAGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATATTGTCTAGCAGTTTCAATGGTTTGAGTGGGGAAATTCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCTATCCTCAGGATAGTTAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTGCCCACAGGAAAAAGTGAAGAAAATGCTACTGCTAACACACAAATTTTGGTTGGTGTATTGCAATGGCCAGGGAATTTGGACAGAACTCCTAAAGGTTGGGATATGCCTGTTAAGCGAAACCCAATGAAAATTGCACTTCCAGGAAGATCTTCATTTCCAAAGTTTGTCAAGGTTGAATACGGAAAAAGTCCAGATCAGAATCTATATAGAGGATTCTGTATTGATGTTTTCCACAAGGTGCTTGAGCTTTTGGGATATGATCTACCCTATGAGTGTCATCCCCTCAACGTAACTTTTCCTGATCTGGTTCAACTCGTGCATAACAAGACTTATGATGCTGTGGTTGGTGACATGACCATACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTGCCATATACAGAATCAGGATTGTCCATGGTAGTTCCACTGAAGTCTCAAGAGTCAACATGGATGTTTCTAAAGCCTTTTACCTGGCAAATGTGGGCGGTAACTGGTGCAATCTTGATTTACACTGTGTTAGTAGTTTGGTACCTTGAACGAGAACCTAATCCAGAGTTTCAAGGCAATTGGAAGAGACAATTCAGTACTGCCCTTTGGTTTACCTTCTCCTCCCTATTCTTCGCTCATAAGGAGCAAGTGCATCGCAACTCTTCTCGTGTGGTGATGGCAGTGTGGCTTCTTCTAGTCATGGTTCTGAGCTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCAGCCAAGCGTCACAAGCATCGAGTGGCTGAAGATGAACAACATGAAAATTGGTTGTGGCGGTACCTCATTTATGAGAACATACCTAGAGAAAGTCGAAAAGTTCAAGCCAGAAAACATCATCACCATAACTAGTGAAAACAATTATGATGTTTCATTCAAAAACAAGTCAATAGCAGCAGCTTTTTTCGAACTCCCTTATGAAAAAATATTCTTAAGTACTTACTGCAAGGGATATTCTGGCTCCGCACCAATCACCAGATTTGGAGGCCTAGGCTTTATGTTCCAAAAAGGCTCCCCAATGGTCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAAATTGGAAGCACAATGGTTATATCACTCAAACGAGTGCACCAACAACTCAACCTCTAATGATACACAAAGTCTGAAGCTTGAAAGTTTCTGGGCTCTCTTTGTCATTTCTGGGGTCACATCTACTATCTGTTTCCTATTTTCTATCATTCAGTCGCAAGGATTTTGTCAGCTAACTCAAAATATGACTCCAGAAGGCAATGGACTCACAAGTGATATGTCAGCTTGGAGAAGAGCACTTGAATTAGGTAAGAGGATTTATATCAAAAAGCTTACTCAGGAAACTCATTTGTACGGGCCTAATATTGGGACACGACAAGATGTAACTGCCTGTTCTTCCAGATGGGACTATGCCAGCAGCACTGATTCTCCTATGCATCAACAAGATACTGCATCCCCAGCATCAACAGTCATTGTGCTTTCTTCACCTCCACCAGAGACACAAATGGAAACCCTGGAAAATAGATAA 2817 0.4136 MTIPEALSRFWLFFLLLISSFCFHSYGDEYTKVIRIGAIIDVNSRIGQEQQIAMEIGAQKYNSTSKTHKLALYFRNTSEEAFRTVSLAEELIEMQKVEVIIGMHTWQEAALVAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHVKCIADIVNAFSWQRVVVVYEEDGHAGGDYGMLSLLSDALQDIGSLIEHRLALPPISFLPDVGELINEELNKLVNKTQSRVFIVLHSSLEMVTHLFREGSKMGLVDKDSAWIISESITDSLDSVDKSVISSYMGGSLGIKMHYSEKSSEYQDFQAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIQAVERMARDTSSSPQALLREILSSSFNGLSGEIHFQAGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPTGKSEENATANTQILVGVLQWPGNLDRTPKGWDMPVKRNPMKIALPGRSSFPKFVKVEYGKSPDQNLYRGFCIDVFHKVLELLGYDLPYECHPLNVTFPDLVQLVHNKTYDAVVGDMTILAERLQYVDFTVPYTESGLSMVVPLKSQESTWMFLKPFTWQMWAVTGAILIYTVLVVWYLEREPNPEFQGNWKRQFSTALWFTFSSLFFAHKEQVHRNSSRVVMAVWLLLVMVLSSSYTASLSSMLTVQQLQPSVTSIEWLKMNNMKIGCGGTSFMRTYLEKVEKFKPENIITITSENNYDVSFKNKSIAAAFFELPYEKIFLSTYCKGYSGSAPITRFGGLGFMFQKGSPMVRDFSKAILQLSEKGELTKLEAQWLYHSNECTNNSTSNDTQSLKLESFWALFVISGVTSTICFLFSIIQSQGFCQLTQNMTPEGNGLTSDMSAWRRALELGKRIYIKKLTQETHLYGPNIGTRQDVTACSSRWDYASSTDSPMHQQDTASPASTVIVLSSPPPETQMETLENR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1314 938 MobiDBLite consensus disorder prediction 902 938 - -
Acco03g1314 938 Pfam Receptor family ligand binding region 60 393 IPR001828 -
Acco03g1314 938 FunFam Glutamate receptor 450 564 - -
Acco03g1314 938 PIRSF IGluLR_plant 5 878 IPR017103 -
Acco03g1314 938 SMART GluR_14 454 792 IPR001320 GO:0015276|GO:0016020
Acco03g1314 938 Gene3D - 456 563 - -
Acco03g1314 938 Pfam Bacterial extracellular solute-binding proteins, family 3 479 790 IPR001638 -
Acco03g1314 938 Gene3D - 149 407 - -
Acco03g1314 938 Gene3D - 707 798 - -
Acco03g1314 938 FunFam Glutamate receptor 564 702 - -
Acco03g1314 938 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Acco03g1314 938 Pfam Ligand-gated ion channel 791 822 IPR001320 GO:0015276|GO:0016020
Acco03g1314 938 SUPERFAMILY Periplasmic binding protein-like I 32 446 IPR028082 -
Acco03g1314 938 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 833 IPR015683 -
Acco03g1314 938 Gene3D - 36 385 - -
Acco03g1314 938 CDD GluR_Plant 453 790 - -
Acco03g1314 938 FunFam Glutamate receptor 153 324 - -
Acco03g1314 938 SUPERFAMILY Periplasmic binding protein-like II 429 791 - -
Acco03g1314 938 Gene3D - 564 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1314 Acco-ChrAcco03 30680605 30684774 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1314 10 829 Ion Channels AT2G29120 32.670 4.44e-140 440