Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1311 ATGCAGAAAGTAGAAGTCATCATAGGGATGCATACATGGCAAGAAGCAGCTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCAGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCACATGTAAAATGCATTGCAGATATAGTGAATGCTTTTAGTTGGCAGAGAGTCGTAGTAGTTTATGAAGAAGATGGCCATGCTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGACGCCCTTCAAGACATTGGTTCACTAATTGAACACCGTTTAGCGCTTCCACCAATTTCTTTTCTGCCGGATGTAGGAGAGCTAATCAATGAAGAGCTAAATAAGTTGGTAAACAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTCGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTGATTCGCTTGACTCAGTGGATAAGTCTGTCATTTCCTCCTATATGGGCGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGCAGTGAGTATCAAGATTTTCAAGCTCAGTTCCGGAAAAAGTTTCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAGGCGTATGATAGCATCAAAGTTGTCATTCAAGCCGTAGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATATTGTCTAGCAGTTTCAATGGTTTGAGTGGGGAAATTCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCTATCCTCAGGATAGTTAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTGCCCACAGGAAAAAGTGAAGAAAATGCTACTGCTAACACACAAATTTTGGTTGGTGTATTGCAATGGCCAGGGAATTTGGACAGAACTCCTAAAGGTTGGGATATGCCTGTTAAGCGAAACCCAATGAAAATTGCACTTCCAGGAAGATCTTCATTTCCAAAGTTTGTCAAGGTTGAATACGGAAAAAGTCCAGATCAGAATCTATATAGAGGATTCTGCATTGATGCTTTCAACAAGGTGCTTGAGCTTTTGGGATATGATCTACCCTATGAGTTTCATCCCCTCAACGTAACTTTTCCTGATCTGGTTCAACTTGTTTATAACAAGGGAAATTTTTTGAAAGAGGAGCAAGTGCATCGCAACTCGTCTTGTTTGGTGATGGCAGTGTGGCTTCTTCTAGTTATGGTTCTGAGCTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCAACCAAGCGTCACAAGCATCGAGTGGCTGAAGAGGAACAACATGAAAATTGGTTGTGGTGGTACCTCATTTAAGAGAACATACCTAGAGAAAGTCGAAAAGTTCAAGCCAGAAAACATCATCACCATAACCAGTGAAGACAATTATGATGTTTCATTCAAAAACAAGTCAATAGCAGCAGCTTTTTTCGAACTCCCTTATGAAAAAGTATTTTTAAGTACTTACTGCAAGGGATATTCTGGCTCCGCACCAATCACCAGATTTGGAGGCCTAGGCTTTATGTTCCAAAAAGGCTCCCCAATGGTCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAAATTGGAAGCACAATGGTTAAGTCACTCAAACGAGTGCACCAACAACTCAACCTTTAATGATACACAAAGTCTGAAGCTTGAATTTTTCTGGGCTCTATTTGTCATTTCTGGGGTCACATCTACTATCTGTTTCCTATTTTCTATCATTCAGTCGCAAGGATTTTGTCAGCTAACTCAAAATATGACTCGAGAAGGCAATGGACTCACAAGTGATATGACAGCTTGGATAAGAACACTTGAATTAGCTAAGCGGATTTATAGCAAAAAGCTTACTCAGGAAACTCATTTGTACGGGCCTAATATTGGGACACAAGAAGATGAAACTGACTGTTCTTCCAGATGGGAGTATTTCAGCACCACTGATTCTCCTATGCATCGACAAGATACTGCATCCCCAGCAGCAACAGTCATTGTGCTTTCTTCACCTCCACCAGAGACACAAATGGAAACCCTGGAAAATAGATAA 2247 0.4099 MQKVEVIIGMHTWQEAALVAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHVKCIADIVNAFSWQRVVVVYEEDGHAGGDYGMLSLLSDALQDIGSLIEHRLALPPISFLPDVGELINEELNKLVNKTQSRVFIVLHSSLEMVTHLFREGSKMGLVDKDSAWIISESITDSLDSVDKSVISSYMGGSLGIKMHYSEKSSEYQDFQAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIQAVERMARDTSSSPQALLREILSSSFNGLSGEIHFQAGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPTGKSEENATANTQILVGVLQWPGNLDRTPKGWDMPVKRNPMKIALPGRSSFPKFVKVEYGKSPDQNLYRGFCIDAFNKVLELLGYDLPYEFHPLNVTFPDLVQLVYNKGNFLKEEQVHRNSSCLVMAVWLLLVMVLSSSYTASLSSMLTVQQLQPSVTSIEWLKRNNMKIGCGGTSFKRTYLEKVEKFKPENIITITSEDNYDVSFKNKSIAAAFFELPYEKVFLSTYCKGYSGSAPITRFGGLGFMFQKGSPMVRDFSKAILQLSEKGELTKLEAQWLSHSNECTNNSTFNDTQSLKLEFFWALFVISGVTSTICFLFSIIQSQGFCQLTQNMTREGNGLTSDMTAWIRTLELAKRIYSKKLTQETHLYGPNIGTQEDETDCSSRWEYFSTTDSPMHRQDTASPAATVIVLSSPPPETQMETLENR 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1311 748 FunFam Glutamate receptor 60 231 - -
Acco03g1311 748 Gene3D - 428 514 - -
Acco03g1311 748 Gene3D - 57 232 - -
Acco03g1311 748 Gene3D - 249 359 - -
Acco03g1311 748 Pfam Receptor family ligand binding region 2 300 IPR001828 -
Acco03g1311 748 Gene3D - 515 608 - -
Acco03g1311 748 SUPERFAMILY Periplasmic binding protein-like II 376 605 - -
Acco03g1311 748 Gene3D - 360 427 - -
Acco03g1311 748 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 445 643 IPR015683 -
Acco03g1311 748 SUPERFAMILY Periplasmic binding protein-like I 3 353 IPR028082 -
Acco03g1311 748 Pfam Ligand-gated ion channel 435 632 IPR001320 GO:0015276|GO:0016020
Acco03g1311 748 CDD PBP1_GABAb_receptor_plant 3 320 IPR044440 -
Acco03g1311 748 SMART GluR_14 361 602 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1311 Acco-ChrAcco03 30651346 30654895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1311 414 615 Ion Channels AT2G24720 30.918 7.71e-22 99.4