Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1305 ATGGAGGCGTCATGGCCGGATTTGAAGGATACTAATCAGAAAACTAGGGATAATCATCATCATGCAGCTGCAAATTCATCAGAAGGGATTCTTGAGAACATATGGGCTAGGGTTATCAGCACAACAAAAAATAATTCATGGGAAGGGCTTCCAAATCTTGATGGAAGAGACGAGTCATCGATGAAGATTCTTCAACGGCTTCCAAGTTTAGGAAGATGGATATCTATGGGAGCTGAAGCATGGGAAGAAATTTTATCTGATTTTCCACAAAACCATCTTCAAGATACATGCAATTACAGTAACAATAATCTGGGGATTTGCAGAAACATTGAGTCCAATTGTAAAGAGGTAGAACAAGAAGAAAAAGAAGAAGGTGGTGGTATTGTGAGGGCAAAGAATAATAATAGTAATAAGGAAGGTGAAATCAGACGACATTACAGAGGAGTGAGAAGAAGGCCATGGGGAAAATATGCAGCAGAAATAAGGGACTCATCAAGGAATGGAGCTAGGGTTTGGCTTGGGACATTTGAGACAGCTGAAGAAGCAGCTTTAGCTTATGATAAAGCAGCTTTGAGAATTAGAGGTCATAAGGCTTACTTGAATTTCCCTCTTGAGACTGTTGCAAATGCTTTAGGGTTTGACCTTAAAGGAAGTCACAGTAGCAATAATCCTGATAATTCTATTATTACAAGGTCTGTTTCTTTAACTTGTGATCAGGAGGATTATTCTAGGAAAAGAAAATTGAGAAATATTGAAGAACCTGCAGCTAAAAGGATGGTGAATGTGGGGAATGAAGTAGATGTTGTTGTGTTTCAGGACTTGGGGAGTGATTACTTGGATAGTTTGTTATCTTCTTTTTGA 861 0.3868 MEASWPDLKDTNQKTRDNHHHAAANSSEGILENIWARVISTTKNNSWEGLPNLDGRDESSMKILQRLPSLGRWISMGAEAWEEILSDFPQNHLQDTCNYSNNNLGICRNIESNCKEVEQEEKEEGGGIVRAKNNNSNKEGEIRRHYRGVRRRPWGKYAAEIRDSSRNGARVWLGTFETAEEAALAYDKAALRIRGHKAYLNFPLETVANALGFDLKGSHSSNNPDNSIITRSVSLTCDQEDYSRKRKLRNIEEPAAKRMVNVGNEVDVVVFQDLGSDYLDSLLSSF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1305 286 PRINTS Ethylene responsive element binding protein signature 169 185 IPR001471 GO:0003700|GO:0006355
Acco03g1305 286 PRINTS Ethylene responsive element binding protein signature 146 157 IPR001471 GO:0003700|GO:0006355
Acco03g1305 286 ProSiteProfiles AP2/ERF domain profile. 145 203 IPR001471 GO:0003700|GO:0006355
Acco03g1305 286 MobiDBLite consensus disorder prediction 7 23 - -
Acco03g1305 286 CDD AP2 153 203 IPR001471 GO:0003700|GO:0006355
Acco03g1305 286 Gene3D AP2/ERF domain 144 205 IPR036955 GO:0003700|GO:0006355
Acco03g1305 286 SMART rav1_2 145 209 IPR001471 GO:0003700|GO:0006355
Acco03g1305 286 FunFam Ethylene-responsive transcription factor 2 144 205 - -
Acco03g1305 286 SUPERFAMILY DNA-binding domain 145 205 IPR016177 GO:0003677
Acco03g1305 286 PANTHER DNA-BINDING DOMAIN 114 281 IPR044808 GO:0003700|GO:0009873
Acco03g1305 286 MobiDBLite consensus disorder prediction 1 25 - -
Acco03g1305 286 Pfam AP2 domain 145 196 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1305 Acco-ChrAcco03 30552801 30553661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1305 30 286 AP2-EREBP Transcription Factor Family AT4G18450 34.462 1.71e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco03g1305 AP2 2.3e-15 CL0081