Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1303 ATGGCGTCATCATCATCATCATCATCGTCTTCCTCCCAACAAACAGAGCTTCTTCCTCTTAACCATGATGACTCTCAAGACATGGTCATCTACCAAGTCCTCAACGAAGCCCACGCTCTTCCACCTAATTCTCATAGTACTCCTACTACTTCACCAATCCTTGGCCTCCATGGTGGTCAGGGGACCACCAGGATCGCGAAGAAGAACTACCGGGGTGTGAGGAGGCGGCCATGGGGGAAATATGCGGCTGAGATCCGGGACTCGACTCGCCATGGGGCGAGGCTGTGGCTGGGGACGTTTGAGACCGCAGAAGAAGCTGCCTTGGCTTATGACAGGGCTGCTTTCAGAATGAGAGGTTCTAAGGCTTTGCTTAATTTCCCTCCTGACTTTGTAGCTCCTACTACTTCTTCTTCTTCTATACTCAGCCCAGAAACCTTGAATAGTAAGAGTTCTTTTAATTCTGATTCAAATGCTGTAAGTTCTGTTGAGAGTCGTAGTTGA 501 0.491 MASSSSSSSSSSQQTELLPLNHDDSQDMVIYQVLNEAHALPPNSHSTPTTSPILGLHGGQGTTRIAKKNYRGVRRRPWGKYAAEIRDSTRHGARLWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDFVAPTTSSSSILSPETLNSKSSFNSDSNAVSSVESRS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1303 166 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
Acco03g1303 166 MobiDBLite consensus disorder prediction 133 166 - -
Acco03g1303 166 MobiDBLite consensus disorder prediction 1 20 - -
Acco03g1303 166 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
Acco03g1303 166 SUPERFAMILY DNA-binding domain 69 128 IPR016177 GO:0003677
Acco03g1303 166 FunFam Ethylene-responsive transcription factor 2 68 128 - -
Acco03g1303 166 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Acco03g1303 166 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Acco03g1303 166 MobiDBLite consensus disorder prediction 42 57 - -
Acco03g1303 166 Gene3D AP2/ERF domain 68 128 IPR036955 GO:0003700|GO:0006355
Acco03g1303 166 PANTHER DNA-BINDING DOMAIN 22 149 IPR044808 GO:0003700|GO:0009873
Acco03g1303 166 Pfam AP2 domain 69 119 IPR001471 GO:0003700|GO:0006355
Acco03g1303 166 CDD AP2 68 129 IPR001471 GO:0003700|GO:0006355
Acco03g1303 166 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1303 Acco-ChrAcco03 30522699 30523199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1303 18 127 AP2-EREBP Transcription Factor Family AT2G44840 54.310 5.88e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco03g1303 AP2 1.6e-15 CL0081