Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1301 ATGGCTTCTTCTAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAACTCCCACCACCACCATCCATGGCAGCACGACATGAACCCCTCCTCCCTCATCTCCTCCGCGGCCGCCACCACCACCATCTGCCACCGCACCCCTTACTCTTCTTCTGCCTCTTCCTCCTCAGGTTGTGAGGAGAGAAGTCCAGAGCCGAAGCCAAGGTGGAATCCAAAACCGGAACAGATTCGGATTCTGGAGGGGATCTTCAACTCAGGGATGGTGAATCCTCCGAGAGATGAGATCCGAAAGATCAGAGCTCAGCTTCAAGAGTATGGTCAAGTTGGCGACGCTAATGTCTTTTACTGGTTCCAGAATCGTAAGTCCAGAAGCAAACACAAACTTCGCAACCTCCAAAACTCCAACAACAAGATCACACTCGAATCATCATCAATAACCCCACCGACACCTCCGCCGCCGCCTCCCCCTCAGTTTTCTCCTTCCAATTCTTCATCATCTGATAACAAATCTTCTCCTAATTCTTCTTCCAAGGAAATAATCAGTATTCTTCCTTCTTTCAAGCCGTCATCATCATCTTCATTCTCCATTAATGGCTTCTCTTCTGATATAATCCTCCCAAGTTCTCCTACTTCTGCTGGTGGTTCTTCTGTGATTAATTATCACCATCCCACCACATATTTTCAGACCCATAATCATGTGACCTCTCTTTCTGAGCCTTTATTCTTTCCTGCTTCTTCGTCTGCTTCAACTCATCAAGGGTTTTGCTTCTCTGAGCTGTCTGGTCTTGTCCAGCATCAAAACGTTGGGCCTTGCACTAGTCTCTTGCTCAGTGAGATGATGAATAATCAGAAGAAAGAACAAGATCATAACAAGAATAACATGAAGAATACTATAATGAATCATCATCATCTTAGTTTCTGTGTGGCAGCTTCTTCTTCTGTAACTCCCACCATTCATCACAGTTCTGTTGTGCCTTCTACCACTAGTGTTACTGTTCCATCCCTCCTCGTCCCTCAAACTCAAGGGGAGGAGGCAAGTGGTACGGCGGCGAAATCCATTGTATACATAAACGACGTCGCATTTGAGGTGGCTGTGGGTCCCTTCAACGTGCGTGCGGCTTTTGGTGAAGACGCGGTTTTAGTGCACGCGGCAACAGGACACCCTGTCCTCACCAACGAGTGGGGCGTCACCCTGCAGTCACTCCAGCACGGCGCATTTTATTATCTGATATAG 1239 0.4786 MASSNRHWPSMFKSKPCNSHHHHPWQHDMNPSSLISSAAATTTICHRTPYSSSASSSSGCEERSPEPKPRWNPKPEQIRILEGIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQNSNNKITLESSSITPPTPPPPPPPQFSPSNSSSSDNKSSPNSSSKEIISILPSFKPSSSSSFSINGFSSDIILPSSPTSAGGSSVINYHHPTTYFQTHNHVTSLSEPLFFPASSSASTHQGFCFSELSGLVQHQNVGPCTSLLLSEMMNNQKKEQDHNKNNMKNTIMNHHHLSFCVAASSSVTPTIHHSSVVPSTTSVTVPSLLVPQTQGEEASGTAAKSIVYINDVAFEVAVGPFNVRAAFGEDAVLVHAATGHPVLTNEWGVTLQSLQHGAFYYLI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1301 412 SUPERFAMILY Homeodomain-like 64 131 IPR009057 -
Acco03g1301 412 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 412 IPR044557 GO:0003700|GO:0050793
Acco03g1301 412 ProSiteProfiles 'Homeobox' domain profile. 64 129 IPR001356 GO:0003677
Acco03g1301 412 Gene3D - 68 134 - -
Acco03g1301 412 MobiDBLite consensus disorder prediction 1 29 - -
Acco03g1301 412 FunFam WUSCHEL-related homeobox 11 68 135 - -
Acco03g1301 412 Pfam Homeodomain 68 128 IPR001356 GO:0003677
Acco03g1301 412 MobiDBLite consensus disorder prediction 127 179 - -
Acco03g1301 412 MobiDBLite consensus disorder prediction 147 162 - -
Acco03g1301 412 MobiDBLite consensus disorder prediction 48 75 - -
Acco03g1301 412 CDD homeodomain 67 129 IPR001356 GO:0003677
Acco03g1301 412 SMART HOX_1 66 133 IPR001356 GO:0003677
Acco03g1301 412 MobiDBLite consensus disorder prediction 48 62 - -
Acco03g1301 412 MobiDBLite consensus disorder prediction 163 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1301 Acco-ChrAcco03 30480128 30482691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1301 1 135 Wox Gene Family AT2G33880 76.471 1.05e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco03g1301 Homeodomain 3.9e-14 CL0123