Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1296 ATGGACCAACGAAACACAGTGATTCTTCTTCTTCTGCTGCTTCTGTTCCAATTTCTGTTCATAGCAGCACATAAATCCAACCAAGACTTTACAGCTTTATCATCTCTCAGTGGGTTTTGGAAAAACAAGCCACCAAGTTGGGTGGGTACAGATCCTTGTGGTGGTGGCTGGGAAGGCATTGGATGTATCAAATCAAGAGTGACCACAATAACATTGGCAAGCATGAACTTAAAAGGCAGCTTGACAGAGGCTATTGGGAGATTAACTGAATTAAGCACTCTGGACCTCTCTTACAACAAAGGCATGAGAGGAACTATTCCAGCTGAAATTGGGAATCTGAGAAAATTACGAACCCTGTCATTGGTTGATTGTGATTTCTTTGGTCCTATTCCTGATTCATTAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTGAGTGGGCCTATTCCTCGTACGTTTGGCAATCTATCCAATGTTATTTGGCTGGATATTTCAGACAACCAGATTGAAGGACCTATCCCGATCTCTGATGAACAAGGACCTGGTCTTGACATGCTACTCAAAACAAAGCACTTTCATTTTGGAAACAACCTCCTCTCAGGGCAAGTTCAACCTAAACTTTTCCGGCCAAATATGATATTGAAACACCTGCTTCTTAACAACAATAACCTAAGTGGCAGCATTCCAGACACTATTGGATTAGTGAAGACATTGGCAGTGATACGCTTTGACCACAATCATATGACTGGAGAAGTACCTTCAAGTATCGGAAATCTCACAAACCTCACTGATCTAAATTTAGGCAATAATAAGCTAAATGGCTCTATGCCTGATCTTACTGAGTTAAATTCACTCGCTACTGTGGATTTGAGCAACAACTCTTTTAATTCTTCCAGTATCCCTTCTTGGGTTTCAAGTTTGCCATATTTAACTACATTAAAATTGGAAAACACTGGAATGCAAGGAAAAATACCTACCTCCTTATTTAGCCAGCCTAATATAGAGACTGTGATAATGAGGAATAATCAGCTCAGTGATACCTTGGATGTTCACAACTATACACCCAATTTGGGTCTTGTAGATTTAGGGACTAATAAGATAACTGACTTCACTCAGAAGAGTCAAAAAATCACTTTTAATGTCATACTAGTTGGCAACCCCATTTGTTTAGAAACAGGAGCTGATTCACAAAGTTATTGCACAGACTCACAAAATAATATCACATATTCAACAGAACCAAATAACTGTAGACCTCCTTCTTGTAGATCAAACACGGTTTCCAGCCCAAACTGCAAATGTGCATTTCCCTATACAGGAGTTCTGACTTCCCTAGCTCTCGGTTTCTCAAACTTCAGTAACAAAAGTTATTTTAAGGATCTTGAGCATAGCTTGTTGGCCTCTTTGCAGTCCCTTGACCTGCCAGTGGATTCATGTTCTCCAAGTAAAATAAAGACGGGGATTATAGCCGGTGCAGTAGCTGCTGGTGTTGTCATTTTGGTACTGTCCATCATTGTAATATTTTTAATCCGCCAGAAGAAAAGAGTAAAGGCATTTAATCCTTTTGCAAACTGGGAACAGAACAATAATAGTGGCAATGCTCCTCAGCTAAAAGGAGCGCGTTGGTTTTCTTTTGAAGAGCTCAAGAAATACACCAAAAGCTTTTCTGACGACTATGCTATCGGAGCCGGGGCGTATGGAAAAGTTTACCAAGCTGTTCTTCCCTCTGGGGAACTGGTCGCCATCAAGCGTGCTTCTCAAGAATCTATACAGGGTGCTATTGAGTTTAAAACTGAGATTGAGCTTCTATCAAGGGTTCATCACAAGAATCTCGTTGGTCTTGTGGGATTCTGTTATGATAAAGGTGAACAAATGCTGGTATATGAGTACGTTCCTAATGGCACGATAATGGACAGCCTTTCAGGAAAATCTGGAATTAGAATGAACTGGATAAGGAGGCTAAAAGTAGCTGTGGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTAGCCGATCCGCCAATCATACACAGGGACATAAAATCAAGTAATATCCTGCTCGATGACCACCTAAATGCAAAAGTTTCTGATTTTGGTCTCTCCAAACTTAAGGATAGTGACAGGGGCCATATCACAACTCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGTAAAGAGCGATGTATATAGCTTTGGAATTACAATGCTTGAGCTGGTAACAGCAAGGAAGCCAGTAGAGCAAGGAAAGTTCATTATAAGAGAGGTTCTAAGAATAATGGATAGATCAAAAGAGTTGTGCAATCTTCATGCTCTTATAGATCCAATGATAAAGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTGTAGACTTAGCATTGAATTGTGTCAATGATCATGCGGAAGAGAGGCCAACAATGGCTGATGTTGTGAAAGAGATTGAGAATATAATGCAACTTGCCGCTTTCAACCCCAATGCTGAATCAACATCAACATCAGAAGCTTATGAAAATGTCAGTGATGGGAAGATTTACCATCCTTATGTCGATGAAGATTTCACCTACACGAGCGTTTTTCCACTGGTAAAGGTGGAGCCTCAGTAA 2643 0.4052 MDQRNTVILLLLLLLFQFLFIAAHKSNQDFTALSSLSGFWKNKPPSWVGTDPCGGGWEGIGCIKSRVTTITLASMNLKGSLTEAIGRLTELSTLDLSYNKGMRGTIPAEIGNLRKLRTLSLVDCDFFGPIPDSLGALNQLTFLALNLNRLSGPIPRTFGNLSNVIWLDISDNQIEGPIPISDEQGPGLDMLLKTKHFHFGNNLLSGQVQPKLFRPNMILKHLLLNNNNLSGSIPDTIGLVKTLAVIRFDHNHMTGEVPSSIGNLTNLTDLNLGNNKLNGSMPDLTELNSLATVDLSNNSFNSSSIPSWVSSLPYLTTLKLENTGMQGKIPTSLFSQPNIETVIMRNNQLSDTLDVHNYTPNLGLVDLGTNKITDFTQKSQKITFNVILVGNPICLETGADSQSYCTDSQNNITYSTEPNNCRPPSCRSNTVSSPNCKCAFPYTGVLTSLALGFSNFSNKSYFKDLEHSLLASLQSLDLPVDSCSPSKIKTGIIAGAVAAGVVILVLSIIVIFLIRQKKRVKAFNPFANWEQNNNSGNAPQLKGARWFSFEELKKYTKSFSDDYAIGAGAYGKVYQAVLPSGELVAIKRASQESIQGAIEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYVPNGTIMDSLSGKSGIRMNWIRRLKVAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVSDFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQQLTVKSDVYSFGITMLELVTARKPVEQGKFIIREVLRIMDRSKELCNLHALIDPMIKQEGNPKGLEKFVDLALNCVNDHAEERPTMADVVKEIENIMQLAAFNPNAESTSTSEAYENVSDGKIYHPYVDEDFTYTSVFPLVKVEPQ 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1296 880 ProSiteProfiles Protein kinase domain profile. 559 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1296 880 SUPERFAMILY L domain-like 44 376 - -
Acco03g1296 880 SMART serkin_6 559 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1296 880 SUPERFAMILY Protein kinase-like (PK-like) 542 840 IPR011009 -
Acco03g1296 880 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 635 844 - -
Acco03g1296 880 CDD STKc_IRAK 565 830 - -
Acco03g1296 880 Pfam Protein kinase domain 562 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1296 880 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Acco03g1296 880 Gene3D Ribonuclease Inhibitor 185 478 IPR032675 -
Acco03g1296 880 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Acco03g1296 880 FunFam Leucine-rich repeat protein kinase family protein 526 634 - -
Acco03g1296 880 Gene3D Phosphorylase Kinase; domain 1 529 634 - -
Acco03g1296 880 PANTHER RECEPTOR-LIKE PROTEIN 55 35 830 - -
Acco03g1296 880 Gene3D Transferase(Phosphotransferase) domain 1 635 853 - -
Acco03g1296 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Acco03g1296 880 FunFam Leucine-rich repeat family protein 28 183 - -
Acco03g1296 880 FunFam Leucine-rich repeat protein kinase family protein 184 283 - -
Acco03g1296 880 ProSitePatterns Protein kinases ATP-binding region signature. 565 587 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1296 Acco-ChrAcco03 30374236 30383393 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1296 1 880 Receptor kinase-like Gene Family AT5G49780 46.570 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco03g1296 Pkinase 5.9e-48 CL0016