LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco03g1294	ATGGACCAACGAAAGACAGTGGTTCTTCTTCAGCTGTTTCTGTTCCATGTTCTGTTCATAGCAGCACAGAACTCCAACCAAGACTTTATAGCTTTATCATCTCTCACTGAGTTTTGGCAAAACAAGCCACCAAGTTGGGTGGGTGCAGATCCTTGTGGTGGTGGTTGGGAAGGCATGGGATGTACCAAATCAAGAGTGACCTCAATAATATTGTTAAGCATGAGCTTAAACGGCAGCTTGACAGAGGCTATTGGGAGATTAACTGAATTAAGCACTCTGGACCTCTCTTACAACAAAGGCATGACTGGAAGAATTCCAGCTGAAATTGGGAATTTGAGAAAGTTGCAAACCCTGTCATTGGTTGGTTGTGATTTCTTTGGTCCTATTCCTGATTCATTAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTGAGTGGGCCTATTCCACGTACATTTGGCAATCTATCCAATGTTGATTGGCTAGATATTTCAGAGAACCAGATTGAAGGACCTATCCCTATCTCTGATGAACAAGGACCTGGTCTTGACCTGCTACTCAAAGCAGAGCACTTTCATTTTGGAAACAACCTCCTCTCAGGGCAAGTTCAACCTAAGCTTTTTAGCTCAAATATGATACTGAAACACCTGCTTCTTGACAACAATAACCTAAGTGGCAGCATTCCAAACACTATTGGATTAGTGAAGACATTGACAACGATACGCTATGACCACAATCATTTAACTGGAGAAGTTCCTTCAAGTATAGGAAATCTGACAAAACTCACTGATCTGAATTTAGGCAACAATAAGCTAAATGGCTTTATGCCCGATCTTACTGGATTAAATTCACTCGCTACTGTGGATTTGAGCAACAACTCTTTTAATTCTTCCAGTATCCCTTCTTGGGCTTCAAGTTTTCCATATCTAACTACATTAACATTGGAAAACACTGGAATGCAAGGAAAAATACCTACCTCCTTATTTAGCCAGCCTAATATAGAGACTGTGATAATGAGGCATAATCAGCTCAATGGTACCTTGGATATTAGCAACTACACACCCAATTTGGCTCTTGTAGATTTGGGGGCTAATAAGATAACTGACTTTGCTCAGAAAAGTCAAAAATTCTCTTTTAATGTCACACTAGTTGGCAACCCCATTTGTCTAGAAACAGGAGCTGATTCACAAAGTTACTGCACAAACTCACAAAACAGTCTGACATATTCAACTGTACCAAATAACTGTATACCTCCTCCTTGTAGTTCAAACATGGTTTCCAGCCCAAACTGCAAATGTGCTTTTCCCTATACAGGAGTTTTGACTTCTAGAGCTCCTGGTTTCTCAAACTTTGGAAACATAAGTTATTTTAAGGATCTTGAGCATGGCTTATTGGCCACTTTCCAGTCCCATGACCTGCCAGTGGATTCAGTTTCTCTCAGTAACCCATTTTGGAACTCTTCTTCTGGTTATTTTAGATTGGACCTAAAAGTCTTCCCATCTCAAAGTGACCGTTTCAACAGAACCGGAGTTGTAAGCATTTCGTTTGTGCTCTCTAATCAGATGTATAAAGCTCCAGAATTTTTCGTCCCATACTATTTTTCTAGTAGCAGTAGCTATGATTTCTCCGCAGAAGAGTCTTCTTCAAGTAAAATAAATAAGGGGATTATAGCCGGTGCAGTAGCTGCTGGTGTTGTCATTTTGGTACTGTCCATCATTGTAATATTTGTAATCCGCCAGAAGAGAAGAACCAAGTCATTTAATCCTTTTGCAAACTGGGAACAGAACAATAATAGTGGCAGTGCTCCTCATATAAAAGGAGCGCGTTGGTTTTCTTTTGAAGAGCTCAAGAAATACACCAACTTTTCTGACGCCAATGCTATCGGAGACGGCGGCTATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGGGAGCTGGTCGCTATCAAGCGTGCTTCTAAAGAATCTATGCAGGGTGCTGTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTAGGATTCTGTTATGATAAAGGTGAACAAATGCTGGTTTATGAGTATGTTCCTAATGGCACTATAATGGACAGCCTTTCAGGAAAATCTGGAATTAAAATGGACTGGATAAGGAGGCTAAATGGGTATTTGGATCCTGAATACTACATGACTCAACAGTTAACAGAAAAGAGCGATGTATATAGCTTTGGAGTTACAATGCTTGAGCTGGTAATAGCAAGGAAGCCAATAGAGCATGGAAAGTTCATTGTAAGAGAGATTCTAGGAATAATGGATAGAGCAAAAGAGTTGTACAATCTTCATGCCCTTATAGATCCAATAATAAAGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTATTGACTTAGCATTGAAGTGTGTCAATGATCATGCGGAAGAGAGGCCAACAATGGCTGATGTTGTGAAAGAGATCGAGAATATACTGCAACTTACCGGTTTCAACCACAATGCTGAAGCAACATCAACATCAGAAGCTTATGAAAATCCCAGAGGTGGGAAGACTTTCCATCCTTATATCGATGAAGACTTCGCTTACACGAGCGTTTTTCCACCGGTAAAGGTGGAACCTCAGTAA	2652	0.4038	MDQRKTVVLLQLFLFHVLFIAAQNSNQDFIALSSLTEFWQNKPPSWVGADPCGGGWEGMGCTKSRVTSIILLSMSLNGSLTEAIGRLTELSTLDLSYNKGMTGRIPAEIGNLRKLQTLSLVGCDFFGPIPDSLGALNQLTFLALNLNRLSGPIPRTFGNLSNVDWLDISENQIEGPIPISDEQGPGLDLLLKAEHFHFGNNLLSGQVQPKLFSSNMILKHLLLDNNNLSGSIPNTIGLVKTLTTIRYDHNHLTGEVPSSIGNLTKLTDLNLGNNKLNGFMPDLTGLNSLATVDLSNNSFNSSSIPSWASSFPYLTTLTLENTGMQGKIPTSLFSQPNIETVIMRHNQLNGTLDISNYTPNLALVDLGANKITDFAQKSQKFSFNVTLVGNPICLETGADSQSYCTNSQNSLTYSTVPNNCIPPPCSSNMVSSPNCKCAFPYTGVLTSRAPGFSNFGNISYFKDLEHGLLATFQSHDLPVDSVSLSNPFWNSSSGYFRLDLKVFPSQSDRFNRTGVVSISFVLSNQMYKAPEFFVPYYFSSSSSYDFSAEESSSSKINKGIIAGAVAAGVVILVLSIIVIFVIRQKRRTKSFNPFANWEQNNNSGSAPHIKGARWFSFEELKKYTNFSDANAIGDGGYGKVYQAVLPSGELVAIKRASKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYVPNGTIMDSLSGKSGIKMDWIRRLNGYLDPEYYMTQQLTEKSDVYSFGVTMLELVIARKPIEHGKFIVREILGIMDRAKELYNLHALIDPIIKQEGNPKGLEKFIDLALKCVNDHAEERPTMADVVKEIENILQLTGFNHNAEATSTSEAYENPRGGKTFHPYIDEDFAYTSVFPPVKVEPQ	883

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco03g1294	883	PANTHER	RECEPTOR-LIKE PROTEIN 55	727	833	-	-
	Acco03g1294	883	Gene3D	Ribonuclease Inhibitor	185	427	IPR032675	-
	Acco03g1294	883	Pfam	Protein tyrosine and serine/threonine kinase	728	829	IPR001245	GO:0004672\|GO:0006468
	Acco03g1294	883	FunFam	Leucine-rich repeat protein kinase family protein	183	282	-	-
	Acco03g1294	883	SUPERFAMILY	L domain-like	55	381	-	-
	Acco03g1294	883	ProSitePatterns	Protein kinases ATP-binding region signature.	632	654	IPR017441	GO:0005524
	Acco03g1294	883	Gene3D	Phosphorylase Kinase; domain 1	597	701	-	-
	Acco03g1294	883	FunFam	receptor-like protein kinase FERONIA	592	701	-	-
	Acco03g1294	883	Gene3D	Ribonuclease Inhibitor	26	184	IPR032675	-
	Acco03g1294	883	ProSiteProfiles	Protein kinase domain profile.	626	883	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco03g1294	883	FunFam	Leucine-rich repeat family protein	27	182	-	-
	Acco03g1294	883	Gene3D	Transferase(Phosphotransferase) domain 1	705	854	-	-
	Acco03g1294	883	Pfam	Protein kinase domain	628	723	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco03g1294	883	SUPERFAMILY	Protein kinase-like (PK-like)	622	837	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco03g1294	Acco-ChrAcco03	30320089	30327979	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco03g1294	19	835	Receptor kinase-like Gene Family	AT1G79620	42.611	0.0	660

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Acco03g1294		PK_Tyr_Ser-Thr	2.1e-07	CL0016