Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1271 ATGATGATCGATTCGTTAACATTGTGTCGGGAGGGCTTGGTTCTTATGGGGGGTTTGATCGATCTCAACACCACGGAGGACGATGAAACACCGTCGTCTCTTTCCTCGGCGGCTTCTTCTTCGTCCTCTCACTCTGGTGTTGTAACTACTGCTTCGGCCGCTTCTTCTTCTTCGAACGCTGTGTGCTTGGAGCTATGGCACGCATGTGCGGGTCCACTGATCTCGTTACCCAAGAAAGGAAGCGTTGTTGTGTACTTCCCACAGGGCCACATGGAACAGCAGCTTCAGGATTTTTCGGTCGATGCCTGTAATATCAATTTCCCATTTCATGTGTTCTGTCGCGTACTTGGTGTTAAGCTCCATGCTGATCAAGGGAGCGATGAAGTGTACTGCCAGGTCTTGTTGGTTCCTGGGAGTGAGCAAGGGGAACAAAAGCTGCCAGAAGGAGAACTTGATGCTGATGGTGAAGAGGAGGATGCTGATGCTGTGGTGAAGTCTACGACACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTTTCGGTGCCTCGTCGAGCTGCTGAAGATTGCTTCCCTCCTCTGGATTACAGCCAACAAAGGCCTTCACAGGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCCGACATATTTACAGAGGTCAACCAAGGAGGCATTTGCTCACAACTGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGTTGTTTCTTAGGGGTGAGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTAAAAAGTGGTGGTACTTTATCAGTGCCATCTGCTCATCAGTTGAATCCTAGCACTCTCATGGATGTGATTAATGCTTTATCCACAAAATGTGCCTTTAATGTGTACTATAATCCCAGGGTTAGCTCTTCAGGATTCATAATACCCCTTCACAAATTCTTGAAGAGCCTTGATCATTCATATTTGGTTGGAATGAGGTTTAGGATGCGTGTTGAAACTGATGAAACTACAGAGAGAAGGTGCACTGGAGTAATTGTTGGAATGAGTGATGCGGATCCTATTAAGTGGCCTGGATCAAAATGGAAATGCCTGGTGGTCAGGTGGGATGACACTGAAGGCCCCAGGCATAATAGGGTTTCCCCTTGGGAGATTGAGCCATCTAGTTCTGCTCCCACTTCCAATAATTTCATGGCTGCTAGTTTTAAGAGGAACAGAATTGGTCTGCCTCCAGAAAAGCCTGAATTTCCAGTCCCGAATAGGATTGGAGGATTAGACTTTGGGGAATCCTTGAGGTTCCATAAGGTCTTGCAAGGTCAAGAAATATTGGGCGTTAATACCCCATATGTTGGTATCAGTGCTCAGAGTCTCCAATTATCTGAAAGTAGGTGCTATCCTGGGTCAAACTGTTCCAGAATTGTAGCAGCAGGAAATAATGTCAGGGTCCCACAAGTGAGTTCTGACATGTCATGCCGTGGCATAGGCTTTAGTGAATCTTCACGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACAGAACCTTGTCTGCTAATGAGGTTCATAGAAATGGTTGCTTTGGAATCTTTGGTGGTAGTCAATTGCTGGGCTCCAGAAATCAATGGTCTACCCAGATGCTGGATAATTCTTCCCATATGCATCCATCTGGGCTGGTTTCATCCCCATCATCTGTTCTGATGTTCCAGCAAGCAGCCAATCCACTTTCCAACTTTGATTATGGGAATAAAAGTAGTCAAGAAATGGACAAAAAAATGCACTACCTAGGTTCATATGCTTCTGAAGTGGAAGGTAGAAAATTAGCAGAATCCCCATCTTATGAGCCTGGGTCCTGTGGCCAAGTTCAGGAAGGAAAACATTCTTTTGGTACGTCAAATTTTCATAATCATCTGGTCGCAGCAAGTTCAGATGATTCTCTTTTGCCACTGACTGATAGCCGAGAGTTGGTTTCCTCTTGTAAAAGTAGTTGCAAACTCTTTGGTTTTTCATTAACTGGGGAGAATCATATTCCCCATGAAGAAGCAGGCTCCTCCACAATCACTTGTCAATTAAATTCCGGACCCTCCTTTATGAGACAAGTTGGGGATGAACTTCAGCTAGGGCATTCATTCAGGAGCAAGGTGTCTGGAAGCAACTGTACCAAAGGTGTACTGCGGTATTGA 2235 0.4573 MMIDSLTLCREGLVLMGGLIDLNTTEDDETPSSLSSAASSSSSHSGVVTTASAASSSSNAVCLELWHACAGPLISLPKKGSVVVYFPQGHMEQQLQDFSVDACNINFPFHVFCRVLGVKLHADQGSDEVYCQVLLVPGSEQGEQKLPEGELDADGEEEDADAVVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGGTLSVPSAHQLNPSTLMDVINALSTKCAFNVYYNPRVSSSGFIIPLHKFLKSLDHSYLVGMRFRMRVETDETTERRCTGVIVGMSDADPIKWPGSKWKCLVVRWDDTEGPRHNRVSPWEIEPSSSAPTSNNFMAASFKRNRIGLPPEKPEFPVPNRIGGLDFGESLRFHKVLQGQEILGVNTPYVGISAQSLQLSESRCYPGSNCSRIVAAGNNVRVPQVSSDMSCRGIGFSESSRFQKVLQGQEILPSQPYRTLSANEVHRNGCFGIFGGSQLLGSRNQWSTQMLDNSSHMHPSGLVSSPSSVLMFQQAANPLSNFDYGNKSSQEMDKKMHYLGSYASEVEGRKLAESPSYEPGSCGQVQEGKHSFGTSNFHNHLVAASSDDSLLPLTDSRELVSSCKSSCKLFGFSLTGENHIPHEEAGSSTITCQLNSGPSFMRQVGDELQLGHSFRSKVSGSNCTKGVLRY 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1271 744 FunFam Auxin response factor 170 274 - -
Acco03g1271 744 SUPERFAMILY DNA-binding pseudobarrel domain 165 279 IPR015300 -
Acco03g1271 744 SMART B3_2 172 274 IPR003340 GO:0003677
Acco03g1271 744 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 59 699 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco03g1271 744 ProSiteProfiles B3 DNA-binding domain profile. 172 274 IPR003340 GO:0003677
Acco03g1271 744 CDD B3_DNA 170 272 IPR003340 GO:0003677
Acco03g1271 744 Gene3D - 170 274 IPR015300 -
Acco03g1271 744 Gene3D - 336 408 - -
Acco03g1271 744 FunFam Auxin response factor 335 406 - -
Acco03g1271 744 Pfam Auxin response factor 299 379 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco03g1271 744 Pfam B3 DNA binding domain 172 273 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1271 Acco-ChrAcco03 29942117 29951169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1271 57 724 B3 DNA Binding Superfamily AT5G60450 42.291 4.28e-149 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco03g1271 B3 2.6e-22 CL0405