Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1267 ATGACATGGTGCAATGAGTCATCAGAGGAAGATGAGTATAGTGATAATAATAACGATAGAAAGTTGATTCATCATCATCAGATTATGAATATTAATAATAATAATGAAGCCTCTGGGAATAATGAAGTCGTCGCAACGAAACCATCTGAAATTCGAACCATTACTTGTCCTTCATGTGGCCATAACATTCAACTGCAAGATCAGGGTGGTGGGATTCATGAGCTGCCAGGGCTACCAGCAGGAGTGAAGTTTGATCCAAATGATGTAGAGATATTGGAGCATTTAGAGGCTAAGGTTCTTTCTGATGTTCGTAAGCTTCATCCTCTCATTGATGACTTCATTCCAACTCTTCAAGGCGAAAATGGCATCTGCTATACTCACCCTGAAAAGCTTCCAGGGGTAAGCAAAGATGGACAGGTCCGCCATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGGAAGAGAAGAAAGGTACATACAGACAAAGACGGAAGCGAGACAAGGTGGCACAAAACAGGAAAAACAAGGCCAGTCCTATGCAATGGTTCCGTCAAAGGTTTCAAGAAGATCCTCGTCCTCTACACCAACTATGGCAGACAGAAGAAACCAGAAAAAACCAACTGGGTAATGCATCAGTACCACCTCGGAAGCAACGAGGAAGAGAAAGACGGCGAGTTAGTTGTCTCCAAGGTTTTCTTCCAGACACAACCAAGACAATGTGCTAATTTGAAGGACCCTTTTGACCAAAAAGTGTTACTTCACAATGACAATAACAATGAAGCGGCAGCAACAGCATCTTTTGTGGACTATTACACTAATCCTCCTTATATAAGTTATGACCATTTGGGTCATCATGGTAACTCAGAAAGCTCTCCCCAACTTATTCCCAACTTGGTTGTTCAAGGTGACCATGCTTCTTCCTTTATTCGTTTAAACATGGATCATTCCACCAAAGCAAGACTTGACAGGAAAATATAA 987 0.4164 MTWCNESSEEDEYSDNNNDRKLIHHHQIMNINNNNEASGNNEVVATKPSEIRTITCPSCGHNIQLQDQGGGIHELPGLPAGVKFDPNDVEILEHLEAKVLSDVRKLHPLIDDFIPTLQGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDKDGSETRWHKTGKTRPVLCNGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFFQTQPRQCANLKDPFDQKVLLHNDNNNEAAATASFVDYYTNPPYISYDHLGHHGNSESSPQLIPNLVVQGDHASSFIRLNMDHSTKARLDRKI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1267 328 MobiDBLite consensus disorder prediction 151 173 - -
Acco03g1267 328 Gene3D NAC domain 88 241 IPR036093 GO:0003677|GO:0006355
Acco03g1267 328 FunFam NAC domain-containing protein 73 87 241 - -
Acco03g1267 328 SUPERFAMILY NAC domain 73 237 IPR036093 GO:0003677|GO:0006355
Acco03g1267 328 ProSiteProfiles NAC domain profile. 78 237 IPR003441 GO:0003677|GO:0006355
Acco03g1267 328 Pfam No apical meristem (NAM) protein 79 218 IPR003441 GO:0003677|GO:0006355
Acco03g1267 328 MobiDBLite consensus disorder prediction 157 173 - -
Acco03g1267 328 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 43 282 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1267 Acco-ChrAcco03 29810120 29814482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1267 1 319 NAC Transcription Factor Family AT1G28470 57.453 2.92e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco03g1267 NAM 1.9e-21 No_clan