Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1265 ATGTCAACCGTTCTTCCTCCTCCTCCTCTGTCTCTCCTCCTCCTCCTCCTCCTTCTTCCCTCCATTCTCTCCCTCAACCAGGAGGGTCTTTACCTTTACCAGTTCAAGCTCTCTCTTGACGACCCCGACGCCTCTCTCTCCTCCTGGAACCACCGTGATGTCACTCCATGTGCCTGGTCCGGTGTCACCTGCGGCGGCGCTTCCAACTCCTCCGTCACTGGTATTGACCTCTCCAACACCAACATAGCCGGTCCATTCTCCGCCTCCATCCTCTGCCGCCTTCCCAACCTCTCCTTCGTCTCCCTCTTCAATAACTCTGTCAACCAAACCCTCCCTTCAGAAATCTCCTCTTGTCGCTCCCTCGTTCACCTCGACCTTTCCCAGAATCTCCTCACAGGTGAACTCCCACATAATCTGTCTCTGCTTCCCAATCTCAGATACCTGGACTTGACCGGAAACAATTTCTCTGGTCCTATTCCTGACTCATTTGGGCGCTTCCGGAAGCTAGAGGTTATTTCTCTTGTGTCTAATCTTCTAGAAGGTACCATTCCCGCTTCTCTGGGTAATATTTCAACTTTAAAGATGCTCAATCTTTCGTACAACCCGTTTTATCCGGGTCGGATCCCACCGGAGATCGGGAACCTTACTAATCTGGAGGTGCTTTGGTTAACGCAATGTAACTTGGTTGGAACGATTCCCGATGAGCTAGGGGAGTTGAAGAAGCTGAAAGATTTGGACCTGGCGTTCAATAATTTGTACGGGTCGATTCCGAGTTCGCTCATGGAGATGACCAGTTTGAACCAGATTGAACTTTATAATAACTCATTGTCCGGTGAGTTGCCTCGGGGATGGTCGAAACTCACTGCATTGAGGCTGCTCGACGCGTCAATGAACCACTTGACGGGGACGATTCCCGATGACTTGTGTCGTTTGCCACTGGAAAGCCTCAATCTCTATGAAAATCGTTTAGAGGGCGAGTTACCGGCGAGCATAGCGGACTCTCCGAATCTCTATGAGCTGAGATTGTTCGGGAATAGGCTAACCGGGAAGCTTCCGGCGAGTCTTGGCAAAAATTCGTCATTACGTTGGGTCGACCTGTCGACCAACCAGTTCTGGGGAGAAATTCCGGCTACTTTGTGTGACCAAGGGCAGTTGGAGGAGCTTCTGTTGATATACAATTTGTTTTCTGGTGAGATCCCGGCGAGTCTGGGGATGTGTCAGAGCTTGACACGAGTCAGACTCGGTTACAATCGGTTGTCCGGCGAAGTTCCGGCAGGTATATGGGGGCTTCCGCATGTATATCTTCTGGAGCTTGTTGATAACTCTTTTTCGGGTCCAATTTCTTCAACGATCGCTGGAGCTGGGAATCTATCGTTATTGGTTCTATCGAAGAACAATTTCAGTGGAGCGATCCCTGATGAGATTGGATGGTTGGAAAATCTTGAGCAATTTTCTGGGAGTGACAACAACTTTACTGGGTCGCTGCCTGATAGTATTGTAAATCTTGGGCAACTTGGAACTCTTGACCTTCATAACAATAAACTCTCTGGCCAGCTTCCGAAGGGTGTACGATCTTTGAAGAAACTCTATGAGTTGAATTTGGCCAACAATGAGATTGATGGAAAAATTCCTGCTGAAATTGGCAGTTTGTCCGTGCTTAATTTTCTTGATCTTTCCCACAATCAACTTTCTGGGAAAGTTCCTCATGGGTTACAAAATTTGAAGCTTAACCAGCTGAATTTGTCGTATAATCAACTTTCTGGAGAACTTCCGACTCAGTTGGCTAAGGATATGTACAGGACTAGCTTTTTGGGTAATCCCGGTTTGTGTGGGGATCTGAAAGGTCTATGTGATAGCAGAAATGACGCTAAAAATGCAGGTTACATTTGGTTGCTACGAGCTATGTTCATCATTGCCACTTTGGTGCTGCTCATTGGTGTGGTCTGGTTCTATTTCAAGTATAGGAACTTCAACAACGCAAGAAGAGCTATTGATAAATCGAAATGGACTCTGATGTCTTTCCATAAACTGGGTTTCGGCGAAGATGAGATTCTGAACTCCCTTGATGATGACAATGTGATAGGAAGTGGATCATCAGGGAAAGTTTACAAGGTTGTACTTAGCAATGGGGAGGCAGTTGCTGTGAAGAAACTATGGGGAGGTATCACAAAGGACATAGAGAGTGGTGATTTTGAGAAGGGCCAAGTTCAAGACAATGCTTTTGATGCCGAGGTTGAGACTCTTGGCAAAATTAGGCATAAGAACATTGTTAAGTTGTGGTGTTGCTGTACTACCAGGGACTGCAAGCTCTTGGTATATGAGTATATGCCCAATGGTAGTCTTGGAGATTTGCTACATAGTAGTAAAGGTGGATTGTTGGATTGGCTGACGAGGTATAAGATAGCAATTGATGCTGCAGAAGGTCTCTCTTATTTGCATCATGACTGTGTCCCGCCAATTGTTCATAGAGATGTAAAATCCAACAATATCTTGTTGGATGGTGACTTTGGCGCAAGGGTGGCTGATTTTGGAGTTGCTAAGGTTGTTGAAACCACTGCAAAGGGAGTTAAATCCATGTCTACCATAGCTGGGTCATGTGGGTACATTGCACCAGAATATGCCTACACGCTCAGAGTGAATGAGAAGAGCGACATATATAGTTTCGGTGTTGTCATACTTGAGTTAGTAACTCGAAGACGCCCGGTAGACCCGGAATTCGGGGAAAAAGACTTGGTTAAGTGGGTGTGCACCACCATGGATCAGAAAGGTGTGGATCACGTACTTGACTCCAGTCTTGATTCTTGTTTCAAAGAAGAGATCCGCAAGGTCCTCAACATCGGCCTCATGTGCACTAGCCCGCTTCCGATCAACCGCCCTGCCATGAGAAGAGTGGTGAAGATGTTGCAAGAAGTAGGCGCAGACAGCAACCAAACCAAGGCATCGAAGAAAGATGGCAAGTTGTCACCATATTACTACGACGAGGGCTCTGATCATGGAAGTGTAGCTTAG 3009 0.4683 MSTVLPPPPLSLLLLLLLLPSILSLNQEGLYLYQFKLSLDDPDASLSSWNHRDVTPCAWSGVTCGGASNSSVTGIDLSNTNIAGPFSASILCRLPNLSFVSLFNNSVNQTLPSEISSCRSLVHLDLSQNLLTGELPHNLSLLPNLRYLDLTGNNFSGPIPDSFGRFRKLEVISLVSNLLEGTIPASLGNISTLKMLNLSYNPFYPGRIPPEIGNLTNLEVLWLTQCNLVGTIPDELGELKKLKDLDLAFNNLYGSIPSSLMEMTSLNQIELYNNSLSGELPRGWSKLTALRLLDASMNHLTGTIPDDLCRLPLESLNLYENRLEGELPASIADSPNLYELRLFGNRLTGKLPASLGKNSSLRWVDLSTNQFWGEIPATLCDQGQLEELLLIYNLFSGEIPASLGMCQSLTRVRLGYNRLSGEVPAGIWGLPHVYLLELVDNSFSGPISSTIAGAGNLSLLVLSKNNFSGAIPDEIGWLENLEQFSGSDNNFTGSLPDSIVNLGQLGTLDLHNNKLSGQLPKGVRSLKKLYELNLANNEIDGKIPAEIGSLSVLNFLDLSHNQLSGKVPHGLQNLKLNQLNLSYNQLSGELPTQLAKDMYRTSFLGNPGLCGDLKGLCDSRNDAKNAGYIWLLRAMFIIATLVLLIGVVWFYFKYRNFNNARRAIDKSKWTLMSFHKLGFGEDEILNSLDDDNVIGSGSSGKVYKVVLSNGEAVAVKKLWGGITKDIESGDFEKGQVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWLTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGVKSMSTIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTRRRPVDPEFGEKDLVKWVCTTMDQKGVDHVLDSSLDSCFKEEIRKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGADSNQTKASKKDGKLSPYYYDEGSDHGSVA 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1265 1002 SUPERFAMILY Protein kinase-like (PK-like) 684 969 IPR011009 -
Acco03g1265 1002 SUPERFAMILY RNI-like 365 595 - -
Acco03g1265 1002 Pfam Leucine rich repeat 528 586 IPR001611 GO:0005515
Acco03g1265 1002 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Acco03g1265 1002 Gene3D Transferase(Phosphotransferase) domain 1 776 994 - -
Acco03g1265 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Acco03g1265 1002 Gene3D Ribonuclease Inhibitor 23 204 IPR032675 -
Acco03g1265 1002 SMART serkin_6 688 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1265 1002 Pfam Protein kinase domain 691 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1265 1002 Gene3D Ribonuclease Inhibitor 205 312 IPR032675 -
Acco03g1265 1002 FunFam Receptor-like protein kinase HSL1 312 619 - -
Acco03g1265 1002 FunFam Leucine-rich receptor-like protein kinase family protein 208 306 - -
Acco03g1265 1002 FunFam Receptor-like protein kinase HSL1 672 775 - -
Acco03g1265 1002 MobiDBLite consensus disorder prediction 977 991 - -
Acco03g1265 1002 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Acco03g1265 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 776 985 - -
Acco03g1265 1002 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Acco03g1265 1002 Gene3D Phosphorylase Kinase; domain 1 672 775 - -
Acco03g1265 1002 ProSiteProfiles Protein kinase domain profile. 688 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1265 1002 SMART LRR_typ_2 502 526 IPR003591 -
Acco03g1265 1002 SMART LRR_typ_2 215 239 IPR003591 -
Acco03g1265 1002 SMART LRR_typ_2 287 311 IPR003591 -
Acco03g1265 1002 SMART LRR_typ_2 550 573 IPR003591 -
Acco03g1265 1002 SMART LRR_typ_2 142 165 IPR003591 -
Acco03g1265 1002 SMART LRR_typ_2 94 118 IPR003591 -
Acco03g1265 1002 Gene3D Ribonuclease Inhibitor 313 621 IPR032675 -
Acco03g1265 1002 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 25 190 - -
Acco03g1265 1002 SUPERFAMILY RNI-like 75 420 - -
Acco03g1265 1002 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 193 970 - -
Acco03g1265 1002 MobiDBLite consensus disorder prediction 974 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1265 Acco-ChrAcco03 29776148 29779372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1265 20 1002 Receptor kinase-like Gene Family AT1G28440 71.385 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco03g1265 Pkinase 4.1e-41 CL0016