Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1251 ATGAATGGAAATTTCAATTTCCTGGTTCAACCTTTAATAGCGCTAACCAGTGCTCTGAGTTCTTCTACTCCTCCAAGCTCAACCATGAAATATCATGTTTTCTTAAGTTTTAGAGGAGAACATACTCGCACAAATTTTACTGATCATTTATACTTTGCTTTCCTCAGAAAGGGAATTGTAACATTTAGGGATGACGAAGAACTTCAGAGAGGAGAAGTCATTTCTGAGAAACTCATTAAGGCTATTGAGCAATCTCTTTTTTCCGTTGTTATCCTCTCTCAGCATTATGCTTCTTCCTCATGGTGTTTGGATGAATTGGAGAATATTATGGAATCCAAACAAGACTTAGGTCAAACAGTTTTTCCAGTTTTTTATGGTGTTGATCCATCTGATGTACGCCGTCAGAAAAGAAGCTTTGCCACAGCTTTTGAGAAACATGAAGGCGTATTTTCAAATGATAAAGTGCGAAGATGGAGAGAAGCTTTAACTACGGTTGCTAATTTGTCTGGCTGGGATACCAGAAATAGACATGAAGCAGAGATTGTCGAAGACATTGCCAAATTCATATGGAACAAACTATGTGATAAATTTCCATCAAGGCTTGAACATTTAGTTGGGGATATTCAATCAAAGGCAGAGAGTATAATCTCCTTTTTAAAGATAGGACTGGATGATAAATGCTTCATAGGGATATGGGGTATCCTTGAATCAAATTTAGATTCAATGAGAATTGCAGAAGATCATCATGATGATATGCAAGATGTTCTTAAAATGTTGAGAAGGAACATTTTCTTCCCAACAAATTTCTATGACATGTTGCTTCTTGATGCTTCCAAAGAATATCTATATATGCATGATTTGCTTCAGGAGATGGGAAGAAGCATTGTTTTGCAAGAATCTCCTGGTGATGCTAGTCGACGCAGTAGATTGTGGTCTATAGAGGACATTGATCAAGTGTTGAAAGGAGACAGGGGGACAGAAAACATTCAAAGTATATGTTTGGACATACAACAAGAATTTGAAGCAAAGTGGCATCCTGATTGCTTTTCAAAAATGCGAAATCTTAGAGTTCTCAATTTAAGCAAGGTGCATCTTTTGCATAATCTCAATTCTCTTCCAAGTGCATTGAAGTTTCTTTCATGGGATCATTATGCTTTGGAATCTCTGCCATCATTTGATCAATTATATGAACTTGAGTGCCTTCAATTATGCAATAGCAATATCAGAAAACTATGGAATCGATCACCGTTTTTAGGTAAGCTGAGGATCATTGATTTGAGTGATTCTGATTGCCTAATTGAAACTCCAGATTTCACTGCTACACCAAATCTTGAAGAATTGGTCCTTACTCGTTGTAGTAACCTAGTTTGGATTCATGAATCTGCTGGACAGCTGAAGAAGTTGGTTAAGTTACATTTGGATTATTGCGTAAACCTTGTAAGTCTTCCGAGTTATTTGGAAACTGATAATCTGGAGGAGTTTATTCTTGGTGGATGCATACATCTTGAGAAGCTTCCTGAATTGGGCAGAAATATGACAAGTCTATACATCTTGGATGTCAGGAGCACTCAAATCGATGACATTCTGTTGTCCATAATTCATTTAATAAATCTCAAATATTTAGATGTGAGTGATTGCAACATGCTCAAGTCAATGCCTGAGCTCCCTTCAAATCTGATTATATGTGGAAGCTATTGTCCTCTGTTGAGGCTTACAAGAGTTCTTGCAAATATGTATGCCCGGCGTGTATTTAAGGGTCCAATTCATGTTTTCTATGACTACGTGAACTATGGTTATCTGTGGAAGAGTGGAGTTCCAAGGTGGTTTAAAGAACGGCAACATCGCTGGAGTAAGAGTAGCTCTGGCGAAGTTCTGACCATAAATGCAAACATACCTCATCATGGAAATGCACATTATAACAGTGAGTGCTGGGAAATTGCTATATGTGTTGTCTTTAGGTGCAGATCAGATGAAGAAGCATGGAGAGGTTTCTCAATAAATTGGCAATTTCAAGATTATTGCCATCCCAATCCCCATGATAACAAAAAAATTCATGATAAAACCCAGCATGTTGGTGGAGTTTGGAATGCAAGACTGGTTTTGAAGCAAGGTAGAACTCAACAGGCATTGTTGCTTACATATCTAGTCTACGTGATTTTGCTTAGAGCTTGA 2172 0.3762 MNGNFNFLVQPLIALTSALSSSTPPSSTMKYHVFLSFRGEHTRTNFTDHLYFAFLRKGIVTFRDDEELQRGEVISEKLIKAIEQSLFSVVILSQHYASSSWCLDELENIMESKQDLGQTVFPVFYGVDPSDVRRQKRSFATAFEKHEGVFSNDKVRRWREALTTVANLSGWDTRNRHEAEIVEDIAKFIWNKLCDKFPSRLEHLVGDIQSKAESIISFLKIGLDDKCFIGIWGILESNLDSMRIAEDHHDDMQDVLKMLRRNIFFPTNFYDMLLLDASKEYLYMHDLLQEMGRSIVLQESPGDASRRSRLWSIEDIDQVLKGDRGTENIQSICLDIQQEFEAKWHPDCFSKMRNLRVLNLSKVHLLHNLNSLPSALKFLSWDHYALESLPSFDQLYELECLQLCNSNIRKLWNRSPFLGKLRIIDLSDSDCLIETPDFTATPNLEELVLTRCSNLVWIHESAGQLKKLVKLHLDYCVNLVSLPSYLETDNLEEFILGGCIHLEKLPELGRNMTSLYILDVRSTQIDDILLSIIHLINLKYLDVSDCNMLKSMPELPSNLIICGSYCPLLRLTRVLANMYARRVFKGPIHVFYDYVNYGYLWKSGVPRWFKERQHRWSKSSSGEVLTINANIPHHGNAHYNSECWEIAICVVFRCRSDEEAWRGFSINWQFQDYCHPNPHDNKKIHDKTQHVGGVWNARLVLKQGRTQQALLLTYLVYVILLRA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1251 723 ProSiteProfiles TIR domain profile. 29 193 IPR000157 GO:0007165
Acco03g1251 723 SMART till_3 30 168 IPR000157 GO:0007165
Acco03g1251 723 Gene3D - 28 198 IPR035897 -
Acco03g1251 723 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 234 IPR044974 GO:0006952
Acco03g1251 723 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 195 - -
Acco03g1251 723 SUPERFAMILY L domain-like 306 560 - -
Acco03g1251 723 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 171 IPR035897 -
Acco03g1251 723 Pfam TIR domain 30 200 IPR000157 GO:0007165
Acco03g1251 723 Gene3D Ribonuclease Inhibitor 328 488 IPR032675 -
Acco03g1251 723 Gene3D Ribonuclease Inhibitor 489 562 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1251 Acco-ChrAcco03 29510721 29517473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1251 253 553 WRKY Transcription Factor Family AT4G12020 35.494 5.70e-33 135