Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1241 ATGGGTGACCTACAAACTTTGCAAACTCTATCTTTAGCACAAAACAAATTACAAGGGCCTATTCCTGAATCATTTGGCAGAATGGTAAGCATAGAGTCCATGGATCTCTCTCATAATTATTTGTTTGGAGTGATTCCAAAGTCCTTTGAGTTATTACGCTATCTTACATACATTAATCTTTCATACAATTTATTGTATGGAGAAATTCCAAATGGTGGCCCTTTTCCAAATTTTACTGCGGAATCTTTTTTGATGAATAAAGATCTGTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAAAGGAAACAAGCACATATCAAATAAAGCGATGGTGATTATAAAATTCTTATTGCCTATCACGATTGTCATTTTGATTGTCTTGGGCATTGTCTTTCTAAAGCATAAGAGAGATGGTGATAATTATTTAACCACAAGCAATTCAGTCAATTTGGATACACCAACAAGGATATCCTATTATGAGCTTCTACAGGGAACAAATGGGTTTGATGAGAGTAATCTTCTTGGGCCTGGAAGTTTTGCATCAGTATACAAGGCAACTCTTTCAAATGAAGAGATAGTTGCTGTCAAAGTATTTAACTTGGACATGGAAGAAGCATCAAGAAGTTTTGATATTGAATGTGCTGCCATGCGTAATTTACGCCATCGCAATCTCATTAAGATCATTAGTAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGCCTTGACAAATGGTTGTACTCTCATAACTATTATTTAGATGTCTTGAAAAGGTTGAATATAATGATTGATGTGGCATTAGCTTTGGAGTATCTTCATCACGGTTCTCCTACACTAGTTGTTCACTGTGATGTCAAACCGGGCAATGTTTTGTTGGACAAAGATATGGTAGCTCATCTTAGTGATTTTGGTATTTCAAAATTGTTTAGTGAAAGGCAACTGGAAATCTATACCAAAACTTTGGCTACAATTGGCTATATAGCACCAGAGTATGGAGCGAATGGAGTTGTTTCCACCAAAGGAGATGTGTTTAGTTATGGAATTTTGCTTATGGAAATGTTTACGAGGAAGAAGCCAACAGATGAGATGTTTGTTGAAGGACTAACATTGAAAGATTGGGTGAGCAAATCAACACCACATTCAATCATCAACATTATAGATACCAATTTGCTGCTCCGTGAAATTCAAAATACTGATAATATATTACCTCATATATCATCAATTTTTGAGTTAGCATTAAACTGTTGCATTGACTTACCAGAGGCACGATGTACTATGACTGATGTTGTACTATCACTGAAAAATTCAAGGCTTTTTTTTATGGAACATGCTGGAGACACTACTAGTTGA 1377 0.3558 MGDLQTLQTLSLAQNKLQGPIPESFGRMVSIESMDLSHNYLFGVIPKSFELLRYLTYINLSYNLLYGEIPNGGPFPNFTAESFLMNKDLCGKSQLQVQPCRKGNKHISNKAMVIIKFLLPITIVILIVLGIVFLKHKRDGDNYLTTSNSVNLDTPTRISYYELLQGTNGFDESNLLGPGSFASVYKATLSNEEIVAVKVFNLDMEEASRSFDIECAAMRNLRHRNLIKIISSCSNDHFKSLIMEFMENGSLDKWLYSHNYYLDVLKRLNIMIDVALALEYLHHGSPTLVVHCDVKPGNVLLDKDMVAHLSDFGISKLFSERQLEIYTKTLATIGYIAPEYGANGVVSTKGDVFSYGILLMEMFTRKKPTDEMFVEGLTLKDWVSKSTPHSIINIIDTNLLLREIQNTDNILPHISSIFELALNCCIDLPEARCTMTDVVLSLKNSRLFFMEHAGDTTS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1241 458 ProSiteProfiles Protein kinase domain profile. 170 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1241 458 Gene3D Transferase(Phosphotransferase) domain 1 246 451 - -
Acco03g1241 458 Pfam Protein kinase domain 171 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1241 458 Gene3D Phosphorylase Kinase; domain 1 152 245 - -
Acco03g1241 458 Pfam Leucine rich repeat 6 65 IPR001611 GO:0005515
Acco03g1241 458 Gene3D Ribonuclease Inhibitor 1 108 IPR032675 -
Acco03g1241 458 SMART serkin_6 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1241 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Acco03g1241 458 SUPERFAMILY Protein kinase-like (PK-like) 150 442 IPR011009 -
Acco03g1241 458 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 74 - -
Acco03g1241 458 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 246 454 - -
Acco03g1241 458 PANTHER OS04G0122200 PROTEIN 4 433 - -
Acco03g1241 458 SUPERFAMILY L domain-like 3 87 - -
Acco03g1241 458 FunFam Serine-threonine protein kinase plant-type 150 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1241 Acco-ChrAcco03 28968557 28970146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1241 1 70 Receptor kinase-like Gene Family AT3G47570 38.571 2.34e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g1241 Pkinase 2e-44 CL0016