Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1240 ATGGGCAACCTGCAAACTTTACTAACTCTATCTTTAGCACAAAACCAATTACAAGGGCCTATTTCTGAATCACTTAGCAGCATGATAAGCATGGAGTCCATGGATCTCTCTCATAATTATTTGTCAGGTATGATTCCAAAGTCCCTTGAGTCATTACTCCATCTTAAATACATTAATCTTTCCTATAACTTACTGTATGGAGAAATTCCAAATGGTGGCCCTTTTCCAAATTTTACCTCAGAGTCTTTTATGATGAATAAAGATCTGTGTGGGAAATCTCAACTACAAGTCCAACCATGTAGGAAAGAAAACAAGCACATATCAAATAAAGTGATGCTGATTATAAAATGCTTATTGCCTATCATGGTTGTCATTTTGATTGTCTTAGGCATTGTCTTTCTAAAGCATAAGAGAGATGGTGATAATTATTCAACCACAAGCAATTTAGTCAATTTGGATACACCAACAAGGATATCATATTATGAACTTCTACAGGGAACAAATGGATTTGATAAGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTTTATAAAGCAACTCTTTCAAATGAAGAGATAGTTGCTGTCAAAGTATTTAACTTGGACATGAAAGAAGCATCAAGAAGTTTTGATATTGAATATGCTGCCATGCGCAATTTACGCCATCGCAATCTTGTTAAAATCATTAGTAGTTGCTCAAATGATCAGTTCAGATCTCTAATAATGGAATTCATGGAAAATGGGAGCCTTGACAGATGGTTGTACTCTCATAACTATTATTTAGATGTCTTGCAAAGGTTAAATGTAATGATTGATGTGGCATTAGCTTTAGAGTATCTTCATCATGGTTCTCCTACACTAGTTGTTCACTGTGATGTCAAACCGAGCAACGTTTTGTTGGACAAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTTCAAAATTTTTTAGTGAAAGGCAACTAGAAATCTATACCAAAACTTTGGCTACAATTGGCTATATGGCACCAGAGCATGGATCTAATGGAGTTGTTTCCACCAAAGGAGATGTGTTTGGTTATGGGATTTTGCTTATGGAAATGTTTACGAGGAAGAAGCCAACTGATGAAATGTTTGTTGAAGGACTAATGTTGAAAGATTGGGTGAGCAAATCAACACCACATTCAATCATCAACATCATAGATACCAATTTGCTGCTCCATGAAATTCTAAATACTGATAATATATTACCTCATATATCATCAATTTTTGAGTTAGCATTAAATTGTTGCATTGACTTACCAGAGGCACGATGTACTATGACTGATGTTGTAGTATCATTGAAAAACATCAAGGCTTTGTTTATGGAACATGCTGCAACCACCACTAGTTGA 1377 0.3522 MGNLQTLLTLSLAQNQLQGPISESLSSMISMESMDLSHNYLSGMIPKSLESLLHLKYINLSYNLLYGEIPNGGPFPNFTSESFMMNKDLCGKSQLQVQPCRKENKHISNKVMLIIKCLLPIMVVILIVLGIVFLKHKRDGDNYSTTSNLVNLDTPTRISYYELLQGTNGFDKSNLLGSGSFGSVYKATLSNEEIVAVKVFNLDMKEASRSFDIEYAAMRNLRHRNLVKIISSCSNDQFRSLIMEFMENGSLDRWLYSHNYYLDVLQRLNVMIDVALALEYLHHGSPTLVVHCDVKPSNVLLDKDMVAHLSDFGISKFFSERQLEIYTKTLATIGYMAPEHGSNGVVSTKGDVFGYGILLMEMFTRKKPTDEMFVEGLMLKDWVSKSTPHSIINIIDTNLLLHEILNTDNILPHISSIFELALNCCIDLPEARCTMTDVVVSLKNIKALFMEHAATTTS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1240 458 SUPERFAMILY L domain-like 2 89 - -
Acco03g1240 458 PANTHER OS04G0122200 PROTEIN 4 447 - -
Acco03g1240 458 Pfam Leucine rich repeat 7 65 IPR001611 GO:0005515
Acco03g1240 458 ProSiteProfiles Protein kinase domain profile. 170 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1240 458 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 246 455 - -
Acco03g1240 458 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Acco03g1240 458 Pfam Protein kinase domain 171 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1240 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Acco03g1240 458 Gene3D Phosphorylase Kinase; domain 1 152 245 - -
Acco03g1240 458 SMART serkin_6 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1240 458 FunFam Serine-threonine protein kinase plant-type 150 245 - -
Acco03g1240 458 Gene3D Ribonuclease Inhibitor 1 109 IPR032675 -
Acco03g1240 458 Gene3D Transferase(Phosphotransferase) domain 1 246 456 - -
Acco03g1240 458 SUPERFAMILY Protein kinase-like (PK-like) 143 442 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1240 Acco-ChrAcco03 28790555 28792151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1240 1 456 Receptor kinase-like Gene Family AT3G47570 38.431 2.25e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g1240 Pkinase 1.6e-46 CL0016