Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1239 ATGGAGTCCATGGATCTCTCCCATAATTATTTGTCAGGTGTGATTCCAAAGTCCCTTAAGTCATTACTCCATCTTAAATACATTAATCTTTCCTACAACTTACTGTATGGAGAAATTCCAAATGGTGGCCCTTTTCCAAATTTTACTGTGGAATCTTTTATGATGAATAAAGATCTGTGTGGGAAATCTCAACTACAAGTCCAACCATGTAGGAAAGGGAACAAGCACATATCAAATAAAGCGATGCTGATTATAAAACTCTTATTGCCTATCACGGTTGTCATTTTGATTGTCTTAGGCATTGTCTTTCTAAAGCATAAGAGAGATGAGGATATTTATTCAACAACAAGCAATTTAGTCAATTTGGATACACCAACCAGGATATCCTGTTATGAGCTTATACATGGAACAAATAGATTTGATGAGAGTAATCTTCTTGGCTCTAGAAATATGGTAGCTCATCTTAGTGATTTTGGTATTTCCAAATTGTTTAGTGAAAGGCAACTGGAAATTTATACCAAAACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCGAATGGAGTTGTCTCTGCCAAAGGAGATGTGTTTAGTTATGGGATTTTGCTTATGGAAATGTTTACGAGGAAGAAGCCAACAGATGAGATGTTTGTTGAAAGACTAATATTGAAAGATTGGGTGAGCAAATCAACACCACATTCAATCATTAACATTATAGATACCAATTTGCTGCACCGTGAAATTCAAAATACTGATGATATATTACCTCATATATCATCACTTTTTGAGTTAGCATCAAATTGTTGCGTTGACCTATCAGAGGCACGATGA 837 0.3548 MESMDLSHNYLSGVIPKSLKSLLHLKYINLSYNLLYGEIPNGGPFPNFTVESFMMNKDLCGKSQLQVQPCRKGNKHISNKAMLIIKLLLPITVVILIVLGIVFLKHKRDEDIYSTTSNLVNLDTPTRISCYELIHGTNRFDESNLLGSRNMVAHLSDFGISKLFSERQLEIYTKTLATIGYMAPEYGSNGVVSAKGDVFSYGILLMEMFTRKKPTDEMFVERLILKDWVSKSTPHSIINIIDTNLLHREIQNTDDILPHISSLFELASNCCVDLSEAR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1239 278 PANTHER OS04G0122200 PROTEIN 150 245 - -
Acco03g1239 278 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Acco03g1239 278 Gene3D Transferase(Phosphotransferase) domain 1 104 278 - -
Acco03g1239 278 SUPERFAMILY L domain-like 2 59 - -
Acco03g1239 278 ProSiteProfiles Protein kinase domain profile. 1 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1239 278 SUPERFAMILY Protein kinase-like (PK-like) 143 251 IPR011009 -
Acco03g1239 278 Pfam Protein kinase domain 143 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1239 Acco-ChrAcco03 28742211 28743635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1239 128 271 Receptor kinase-like Gene Family AT3G47570 36.000 2.67e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g1239 Pkinase 5.9e-13 CL0016