Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1220 ATGGTGGCGCCGACGCCTGCACCGGCGGCTGCGCTCTCTCCTGCGGCAAATTCTTCAAATCCCCAAGTTAAAAAGAAAGGCCAATCATCTCCAACAACTATTGTGATAGTTGTGGTTTCTATTATTGGTTCGGGGTCACTTCTTGGTTTTGCTTACTATCTCTTAAGGAGGAAAATGAAGAAGAGACGTAGAGATGTTCTTAGACAAAAATACTTTGGAAGTGAAGGCACCACCTTAGAGCCTTTACAGTTCAGTTTGGCTACTATTGAAACTGCTACAAATCAATTTTCACATGAAAACAGTTTAGGCAAAGGTGGATTTGGACTAGTTTATAAGGGTGTTCTTTCAAATGGCCAAGAAATAGCTGTGAAAAGACTCTCAAAAGTTTCTGGCCAAGGTGTAGAAGAATTCAAGAACGAGGTTTTATTAATAGCCAAACTCCAACACAGAAATTTGGTGGCATTATTAGGATTTTGCATAGATGAGCAAGAGAAAATACTTATTTATGAATATGTTCCCAACAGAAGCCTGGATTACTTTCTATTTGGTTCCCTAAATAGCAAAGTACTAACTTGGTTGGAGCGCAGTAAAATCATCAAAGGAGTCGCTCAAGGAATCCTTTATCTTCATGATTATTCTCGCCTCAAAATTATACATTGTGATCTCAAACCTAGCAATATTTTGTTAGATGATGAAATGAATCCAAAGATTTCAGACTTCGGTTTGGCTAAGATGGTTGCTATCAATGAAAATGAGGGAAATACAAATATAGTTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAGTTAGATATTTTCAGTTTTGGAGTTATAATTTTAGAAATAATAAGTGGAAGGAAGAATGCAAGCCGTCATAATCAATCACAATATGCTGATAGCCTCTTAAACTATGCTTGGAACCAATGGAAGGATGAAAAGTTATTGGAGATATTGGATTCAAATCTTAAAGAATTGGAGTCATTTAATGAAATGATTAAGTGCATCCAGATTGGTCTGTTATGTGTTCAAGAGAATCCAGAAGCTAGGCCTTCCATGGCAACAATTATTTCATATCTAAGCGATGATTCAATTCAATTACCAATTCCACAAGAGCCTGCATTCTTTTTGCATGGTCGAATGGATCCTAACAATGTTGAATCTCAAAGTGGAGAATCATGCTCTACTAATGAAGTATCTAAGAGTGAATTCTTTCCTCGCTAG 1248 0.3678 MVAPTPAPAAALSPAANSSNPQVKKKGQSSPTTIVIVVVSIIGSGSLLGFAYYLLRRKMKKRRRDVLRQKYFGSEGTTLEPLQFSLATIETATNQFSHENSLGKGGFGLVYKGVLSNGQEIAVKRLSKVSGQGVEEFKNEVLLIAKLQHRNLVALLGFCIDEQEKILIYEYVPNRSLDYFLFGSLNSKVLTWLERSKIIKGVAQGILYLHDYSRLKIIHCDLKPSNILLDDEMNPKISDFGLAKMVAINENEGNTNIVVGTYGYMSPEYAMFGQYSEKLDIFSFGVIILEIISGRKNASRHNQSQYADSLLNYAWNQWKDEKLLEILDSNLKELESFNEMIKCIQIGLLCVQENPEARPSMATIISYLSDDSIQLPIPQEPAFFLHGRMDPNNVESQSGESCSTNEVSKSEFFPR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1220 415 ProSiteProfiles Protein kinase domain profile. 96 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1220 415 SMART serkin_6 96 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1220 415 FunFam cysteine-rich receptor-like protein kinase 10 172 375 - -
Acco03g1220 415 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Acco03g1220 415 SUPERFAMILY Protein kinase-like (PK-like) 79 389 IPR011009 -
Acco03g1220 415 Gene3D Phosphorylase Kinase; domain 1 56 171 - -
Acco03g1220 415 MobiDBLite consensus disorder prediction 394 415 - -
Acco03g1220 415 MobiDBLite consensus disorder prediction 1 27 - -
Acco03g1220 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Acco03g1220 415 Gene3D Transferase(Phosphotransferase) domain 1 172 375 - -
Acco03g1220 415 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 410 - -
Acco03g1220 415 CDD STKc_IRAK 102 368 - -
Acco03g1220 415 MobiDBLite consensus disorder prediction 12 27 - -
Acco03g1220 415 Pfam Protein kinase domain 97 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1220 415 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 56 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1220 Acco-ChrAcco03 28275458 28281910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1220 15 388 Receptor kinase-like Gene Family AT4G23190 51.724 6.28e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g1220 Pkinase 2.2e-49 CL0016