Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1210 ATGGAAACAAGCAGAGCTGAAGGAAAGAGGAGCTCGAGGTACAGGAAAGAGGAAGAGGAAGAGGAAGATGAAGAGGAAGCCGACGGCGATGAAGAAGAGACAGAGAGTGAAGTTGGCTCTGGAGAAGAACATGGAAGAAAGAGAAGGGTTATATCAAATACATACAACAGGAGAGGCCCCAAACACGGAAGCTCCTCGGCGGTGCCACCGTGTTGTCAGGCCGATGATTGCGGGATTGATCTGAGCAGCGTCAAACAGTATCATCGGCGGCACAAGGTCTGTGAGCACCACGCTAAAGCACCGGTCGTACTCATTTCAGGGAATGAGCAACGATTTTGCCAGCAATGTAGCCGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAACGGAGTTGTAGAAGACGTTTGGCAGGGCATAATGAGAGAAGGCGAAAGGTTTCATCTGATTATCATGGAGAAGGTTATAATTAA 471 0.482 METSRAEGKRSSRYRKEEEEEEDEEEADGDEEETESEVGSGEEHGRKRRVISNTYNRRGPKHGSSSAVPPCCQADDCGIDLSSVKQYHRRHKVCEHHAKAPVVLISGNEQRFCQQCSRFHELSEFDNSKRSCRRRLAGHNERRRKVSSDYHGEGYN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1210 156 MobiDBLite consensus disorder prediction 142 156 - -
Acco03g1210 156 MobiDBLite consensus disorder prediction 1 69 - -
Acco03g1210 156 Gene3D - 63 133 IPR036893 GO:0003677|GO:0005634
Acco03g1210 156 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Acco03g1210 156 MobiDBLite consensus disorder prediction 1 17 - -
Acco03g1210 156 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
Acco03g1210 156 MobiDBLite consensus disorder prediction 137 156 - -
Acco03g1210 156 Coils Coil 15 35 - -
Acco03g1210 156 Pfam SBP domain 72 145 IPR004333 GO:0003677
Acco03g1210 156 PIRSF SBP 1 156 IPR017238 GO:0003677|GO:0003700|GO:0009908
Acco03g1210 156 MobiDBLite consensus disorder prediction 18 38 - -
Acco03g1210 156 SUPERFAMILY SBT domain 69 150 IPR036893 GO:0003677|GO:0005634
Acco03g1210 156 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 29 145 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1210 Acco-ChrAcco03 27977131 27979666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1210 58 154 SBP-box Gene Family AT3G15270 64.286 9.70e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco03g1210 SBP 1.1e-33 No_clan