Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1206 ATGAGTCACCTTAGCTTACCAAGCAGTTCGTCGTCGTCATCTCGGAGGATCTGGAAATACGACGTGTTTCTAAGTTTCAGAGGTGAGGACACTCGCAACAACTTCACCGGTCATCTTTATAAAGCTCTTGATGGAAAAGGTATATACACCTTCAAGGATGATATAAAACTCCAGAGAGGAGAAAAAATTCGACCAGAACTCCTCAGAGCAATTGAACAATCCCAGATTTCAGTCGTCGTCTTATCCAAAAACTATGCTGATTCGTCATGGTGCTTGGACGAACTGGTAGAAATTTGCAAGGGAATCAATGAACTGGGATACACTGTTCTACCAATTTTCTACCATGTGGATCCATCTGATGTACGGAAACAGAGAGGGCCTTTCAAAGAAGCCTTTGATAAACACGAGCAAAACTCAAGTCATAAGATACCGAAATGGAAGTCAGCTTTGGAAAACGTAGCCGATCTCGCTGGTCATCATGTAAATGAGAACAAATCAGAGCCACATATTATTGAGAAAATCGTTATGGATGTAACCGATAGACTGAAACATAAATTCTCAAGTCAGGTTGATGATCTAGTGGGGATGCAATCTCGTGCAGAAGCCTTTGTAAAGCTTCTAAATCTAGATTCATCGGATGATGATGTTCAATTTGTGGGGATTTTGGGAATGCCCGGAGTAGGGAAAACAACTCTTGCTGAAGTTGTTTGCAATAGAATCTCCCACCACTTTGAAGCTTGCTGTTTTCTTCTTGATGTAAGTAAAGTTCACAAGGGTCCTAAGGGTCTTGTCAGATTACATAAACAACTTCTTTCTGAAACAGTGGGGATAGATCAAACGGTTTGGGATGAACGCACGGGAAGAGATTTAATAAGCACTAGGCTTCGCATTTGTAAGACTATTATTGTTGTTGATAATGTTGATCGTGCAGATCAATTGGAGAATTTGGTTGGAAAGCTTGAGTGGTTTGGTCCTGGGAGTAGAATCATCATCACAACTAGAGATAAGCAAATCCTAGAGCTTCATGGAGTGCATAAAGATAAAGTTTACAAGGTTGAACTACTGAATGATGAAGAAGCTCTTGAATTACTTTGTAGAAAAGCCTTCAAAAGCTATGGTCCTAATGATGGATTTAAGGAGTTGACTCGTAAACTTCTACAGTATGCTAAATCACATCCACTAGCAATCAAAGTGTTAGGTTCCTCTTTGTTTAACCGCAAACAATCAGAGTGGGAAGCACAATTGGAAAGATTGAAAGAAAATCCCAACCAAGAGGTTATGGGAGTCCTGGAAACGAGTATAGGTTTGCTTGAACGAGTAGACCGGGATATATTTGTAGATGTTGCTTGTTTCTTCGAGGGAGAAGATGTGAATTATGCCAGAAAAATTCTACACCATTGTGGATTTAATCCTGATCTTGGAATAGGAAATCTGCGTAAAAAATCACTCATAGTCATCGTCAATGGAACACTTTGGATGCACGATTTGATCAAAGAAGTGGGGAGGAAAATCGCAAGAGGAGAATTTCCTCAAGAGCCAGCAAAGTGGAGCAGACTCTGGTTGTACAAAGATCTTCAAGCCGTAAAGACAGCAGCAGAAAAAGTTGAAGCCATTGTGTTGAAGGAGGAAGATGTGGATGTGGCTGAGATGCTTCCATTGAGGGCTGAAGCTTTATCCCAAATGACCCGCCTCAGGCTAATCATATTTCCTTCTATGAAGTTTGCAGGGAAGTTGAACAATCTTTCCGATGACTTGAGATTTCTTTCCTGGCAGAAATTTCCTTTCAACTGTTTGCCATCAAGTTTTCAACCAACCAAACTTGTTGAATTGATCTTGATTGATAGCCATATAAGACTGCTATGGGAAGGTGTAAAGGCTTTGCCAGAGTTGAAGATCATAGATCTACGTGGCTCCAAAAATCTAATAAAGACACCAAATCTCGAAGGAGTGAAAAATCTTAAGAAGTTAGATCTTGAAGGATGTAGTGGATTATTAGAGGTTGATGCTTCTATAGGAAATCTTAGAAAGCTAACATTCCTGAATTTGAGAAACTGTGATCGGCTAATCAGTATCCCAAACACCTTATTTCTTTCAACTTCTCTTGAAACTCTGAACCTTCCAGGTTGTTTAGTACTTGCACAGCGTTTGAACTTCGGAAGTCCTCCATAG 2169 0.402 MSHLSLPSSSSSSSRRIWKYDVFLSFRGEDTRNNFTGHLYKALDGKGIYTFKDDIKLQRGEKIRPELLRAIEQSQISVVVLSKNYADSSWCLDELVEICKGINELGYTVLPIFYHVDPSDVRKQRGPFKEAFDKHEQNSSHKIPKWKSALENVADLAGHHVNENKSEPHIIEKIVMDVTDRLKHKFSSQVDDLVGMQSRAEAFVKLLNLDSSDDDVQFVGILGMPGVGKTTLAEVVCNRISHHFEACCFLLDVSKVHKGPKGLVRLHKQLLSETVGIDQTVWDERTGRDLISTRLRICKTIIVVDNVDRADQLENLVGKLEWFGPGSRIIITTRDKQILELHGVHKDKVYKVELLNDEEALELLCRKAFKSYGPNDGFKELTRKLLQYAKSHPLAIKVLGSSLFNRKQSEWEAQLERLKENPNQEVMGVLETSIGLLERVDRDIFVDVACFFEGEDVNYARKILHHCGFNPDLGIGNLRKKSLIVIVNGTLWMHDLIKEVGRKIARGEFPQEPAKWSRLWLYKDLQAVKTAAEKVEAIVLKEEDVDVAEMLPLRAEALSQMTRLRLIIFPSMKFAGKLNNLSDDLRFLSWQKFPFNCLPSSFQPTKLVELILIDSHIRLLWEGVKALPELKIIDLRGSKNLIKTPNLEGVKNLKKLDLEGCSGLLEVDASIGNLRKLTFLNLRNCDRLISIPNTLFLSTSLETLNLPGCLVLAQRLNFGSPP 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1206 722 SUPERFAMILY "Winged helix" DNA-binding domain 425 525 IPR036390 -
Acco03g1206 722 Pfam TIR domain 19 192 IPR000157 GO:0007165
Acco03g1206 722 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 184 - -
Acco03g1206 722 Gene3D - 354 437 IPR042197 -
Acco03g1206 722 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Acco03g1206 722 SUPERFAMILY L domain-like 543 710 - -
Acco03g1206 722 PRINTS Disease resistance protein signature 294 308 - -
Acco03g1206 722 PRINTS Disease resistance protein signature 389 403 - -
Acco03g1206 722 PRINTS Disease resistance protein signature 218 233 - -
Acco03g1206 722 PRINTS Disease resistance protein signature 648 664 - -
Acco03g1206 722 Gene3D - 179 350 IPR027417 -
Acco03g1206 722 SMART till_3 19 156 IPR000157 GO:0007165
Acco03g1206 722 Pfam NB-ARC domain 213 424 IPR002182 GO:0043531
Acco03g1206 722 Gene3D Ribonuclease Inhibitor 549 716 IPR032675 -
Acco03g1206 722 Gene3D - 16 178 IPR035897 -
Acco03g1206 722 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
Acco03g1206 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Acco03g1206 722 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 712 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1206 Acco-ChrAcco03 27810937 27814299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1206 20 713 WRKY Transcription Factor Family AT4G12020 31.440 1.75e-78 273