Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1195 ATGAGCACTCATTCTACAAGAAGTCAACAACGAAGGGAGGCTATTGATCTTAATAGGGCTCCACCTCAAGTGATTCTCGAGCAGGAGACAACTCAATTTGTTCATCAACCTATTGATTTGGAGGCTTTTGATGATGATGTTATTTTAGCTACACAAAGTGATTTTCTTGAGGCTAAAAGCAATTCAAGAAGGCATCGTGGGAGGACTATAGTTGATGTGGACTTATTTGATTATGTGAGACAGGCAGCTGAATTTCCTCCTGACAATCGCACAACAGACTATTTTAACCAACAACTTACTAATTCTGATCCACACATAGGATTTGAAGGCAGTGCTAGTTCTCAGGAGAAAGATACAAAGTCAGCTGAACCTCCAAAGGAGCATGTCTTTATCTGTCCAATATGTATGGAACCACTTGTGGAAGAAGTGTCAACAAAGTGTGGTCATATATTCTGTAACAGTTGTATCAAGGCTGCAATAAAAGCACAAGGAAAATGCCCTACATGTAGGGTCAAGGTCACTGCAAAAGGGCTTATAAGGGTGTTTCTTCCAACACCAACTTCTCCTTAG 570 0.4053 MSTHSTRSQQRREAIDLNRAPPQVILEQETTQFVHQPIDLEAFDDDVILATQSDFLEAKSNSRRHRGRTIVDVDLFDYVRQAAEFPPDNRTTDYFNQQLTNSDPHIGFEGSASSQEKDTKSAEPPKEHVFICPICMEPLVEEVSTKCGHIFCNSCIKAAIKAQGKCPTCRVKVTAKGLIRVFLPTPTSP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1195 189 SMART ring_2 132 169 IPR001841 -
Acco03g1195 189 Pfam Zinc finger, C3HC4 type (RING finger) 132 169 - -
Acco03g1195 189 PANTHER ELFLESS, ISOFORM B 7 185 - -
Acco03g1195 189 MobiDBLite consensus disorder prediction 1 20 - -
Acco03g1195 189 ProSiteProfiles Zinc finger RING-type profile. 132 170 IPR001841 -
Acco03g1195 189 ProSitePatterns Zinc finger RING-type signature. 147 156 IPR017907 -
Acco03g1195 189 SUPERFAMILY RING/U-box 131 176 - -
Acco03g1195 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 184 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1195 Acco-ChrAcco03 27556462 27560811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1195 7 185 C3H Transcription Factor Family AT5G48655 44.898 2.96e-36 124