Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1190 ATGGAGGACAACCCTAGTTCATCATCCAGAACTACTGACAGAAAACTCATAGTGAGGAATCGGAGATATCAAATGAAGGCTCTCTACTCCAAGCTCAAATCTCTTGTTCCTCATCAAACTCCGAGGGAGGCTATTCCACTACCTGATCAGTTAGAGGAGGCAACAAATTACATCAAGAAGTTGCAGATGAAGTTGGAGAGAATGAAGGAGAAGAAGGACAACCTAATTGCAACAAATAATCAAAGGTCAAATTTTATCAAATATAGAAATATGATTAAGAAATCATCAAAATCAGCGCCATGGTTTGAGATCAGAGAAGTGGGTACCATTGCCTTACAAGTTGTTCTGAGGACTGAATTGGATAGTGAGTTTTCGTTCACTGATATCATTCGGCTTCTTCATGAAGAAGGAGCAGATATTGTTAACGCCAATTACACAGTTGTTGAAGATGTAGTTATTCATATAATATACTGTGAGGTAGAGGAGTCTGTCAACGTTGCTGCAATGATATCTGAGAGATTAAGGAGATTCTAG 534 0.3876 MEDNPSSSSRTTDRKLIVRNRRYQMKALYSKLKSLVPHQTPREAIPLPDQLEEATNYIKKLQMKLERMKEKKDNLIATNNQRSNFIKYRNMIKKSSKSAPWFEIREVGTIALQVVLRTELDSEFSFTDIIRLLHEEGADIVNANYTVVEDVVIHIIYCEVEESVNVAAMISERLRRF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1190 177 Coils Coil 51 78 - -
Acco03g1190 177 Gene3D - 2 90 IPR036638 GO:0046983
Acco03g1190 177 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 79 IPR036638 GO:0046983
Acco03g1190 177 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Acco03g1190 177 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 176 - -
Acco03g1190 177 Pfam Helix-loop-helix DNA-binding domain 19 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1190 Acco-ChrAcco03 27420238 27422369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1190 6 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.458 3.95e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco03g1190 HLH 1.5e-06 No_clan