Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1167 ATGGCTGAGGCCTCTGCAACTAACGGAACCCACGAAGTTGTTCTTAATGTCAATGATGGCAAATCAAATGAAGGATCCATCACCTTTGTCTCTATCCCTTTCTTACAGAAGTTGCTGGCAGAGTTGGTGGGGACATACTTCTTAATATTTTTAGGTGGAGTATCAGTTGTGGTGAACAATAACAACAACAATATCATAACACTTCCAGGGATTGCCATCGTCTGGGGTCTTCTGGTTATGGCTCTTGTCTACTCACTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACTCTGGCTTTAGCTTCCACTAGGCGACTTCCTCTCAAACAGGTACCAGCTTATATATTAACTCATGTTGTAGGATGCCTTCTTGCAAGTGAGACTGTGAGACAAATTTTCACCGGAGAAAAGGACCAATTCATAGGAACATTAATAGCTGGGTCATATCTTCAGGGCTTTGTGGTTGAATTCTTAGTCACCTTCTTCCTCATGTTCGTCGTCTCTGGTGTGGCAATTGATAGCAGAGCGATTGGTGAACTAGCTGGGATCGTCATAGGTGCAACCGTGATGCTTAATGTGTTGGTTGCCGGGCCTATAACCGGAACGTCGATGAATCCGGCGAGAAGCCTAGGGCCGGCCATTGTATGGCATGAGTACAGAGGAATATGGGTGTACAAGACAGCACCGGTGGCAGGAGCAGTGGCGGGAGCATGGGCGTATAACATCATAACGTATACGGACAAGCCAAAACATGAGACCACAAAGGGTGGCACTTCTTTTCTCAAAGCTTCAAGCTGCTGTTGCGGTGCCTCCAAGTGA 825 0.4679 MAEASATNGTHEVVLNVNDGKSNEGSITFVSIPFLQKLLAELVGTYFLIFLGGVSVVVNNNNNNIITLPGIAIVWGLLVMALVYSLGHISGAHFNPAVTLALASTRRLPLKQVPAYILTHVVGCLLASETVRQIFTGEKDQFIGTLIAGSYLQGFVVEFLVTFFLMFVVSGVAIDSRAIGELAGIVIGATVMLNVLVAGPITGTSMNPARSLGPAIVWHEYRGIWVYKTAPVAGAVAGAWAYNIITYTDKPKHETTKGGTSFLKASSCCCGASK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1167 274 PANTHER AQUAPORIN NIP2-1 24 254 IPR034294 -
Acco03g1167 274 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 SUPERFAMILY Aquaporin-like 30 255 IPR023271 -
Acco03g1167 274 Pfam Major intrinsic protein 30 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 Gene3D Glycerol uptake facilitator protein. 9 258 IPR023271 -
Acco03g1167 274 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1167 274 ProSitePatterns MIP family signature. 93 101 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1167 Acco-ChrAcco03 26687898 26691342 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1167 36 267 Major Intrinsic Protein MIP AT5G37810 55.603 2.37e-85 255