Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1151 ATGGATCAAAGGAAGAGTCTCGATCGAAACCCTAAACCCCCTCCTTCTCGTGTGCGTCGCTTCCTCTGCTGTGACACCTCTCTAAGCCCTGCAATTCCTTTGAGCTTAGCACCGTGCTCTGTGTCATCAATCATGGCACATGGAGAACCATCTTCTTCTATCTCTTATAACTGGTCTAACGATGTGTTCAGTAGTTATTGTGGTTTAGATACTCGCTTTAGTTTCACCAGCCATCTCCATCACTCTCTGCGTCAAAAAGGACTTAGTGTATTTCTTAATGATGAAGTGTGTAGGAAGGGTGAAGAAATGCTTGCTATACTTTTCAATGCTATACGTGAATCAAGAATAGCCATCATTTTATGCAAAGGCATTGGCTCAACTGGAGGAAAGATTCATGGACAAGAGGCACCAGGTAGCAGAATGGACAAGAGGCACCAGGTAGCAGAATGGAGGCGTGCTCTGTCTCAAGCTGCTGACCTCTCATGCTTGGTTTTCCGACCCAGGACTATGAATTTACGTGTGTATATTAGCGCGATCGTAGGAGTAGTTACTGGTTGGATTAACAAAAAAGAGGAAGAGGAAGAAAAACTTGTTGGGTATGGTGCAGATGGGATCTTTTATGCTGCCCGACACAGGGAAACCGGAGACTTATGTGCAGCACAGGAACTAAATATTCGCAGAGCTGAAAATGATGAATCCATTCGACATGGAATCAAATCTTTTAGCCAACTGGAAAAACATCCAAACATTGTAGAGTATTATGGCCATAAAGAGGAAGGAGGCCGCATTTCTCTATACATGGAATACATCCAACCTGGTTCATTGAAGAAATATATCTCGGAATCTAAACGAGGGGATCATTTGGAGGAGGGTCATAGAAACGTAGAGGAAGATAGGGAGAAACAGAACAGTGATGATGGGGGAGAGGAGAGACAAACCTTAAGGGACTTAAAACCAGCCAATCTACTTGTTGATTCTAAGAACATTGTAAAGCTAGTTGACTTTGGTTTGGCTAAATTGATAGAAGAATCTAAAGGCATGTGCTCTGTGCCAGGAACTCAACTTTATGCAGCGCCAGAGGTTGTTGGAAACCAAAATTATCAGAGGTTGCATGAAGTTCTTGCTACTGATATATGGAGTTTGGGTTGTGTAATCATTGAAATGTCCTCTGGGAGTCCACCTCGTTGGTCTACTTCTGATTCGCATCCACACATACCAGAGGAGTTATGCCAAGAGGGTAAAGATTTTCTCGAACTTTGCTTCAAAATAGAACCAGCCGAGCGGCCATCTGCTGAAGAATTACTAGAGAACCCGTTTGTAAAAGCACAAGTTGAAGTGGTGAAGAACACCGGTTTGTACAAGGATTGA 1368 0.4327 MDQRKSLDRNPKPPPSRVRRFLCCDTSLSPAIPLSLAPCSVSSIMAHGEPSSSISYNWSNDVFSSYCGLDTRFSFTSHLHHSLRQKGLSVFLNDEVCRKGEEMLAILFNAIRESRIAIILCKGIGSTGGKIHGQEAPGSRMDKRHQVAEWRRALSQAADLSCLVFRPRTMNLRVYISAIVGVVTGWINKKEEEEEKLVGYGADGIFYAARHRETGDLCAAQELNIRRAENDESIRHGIKSFSQLEKHPNIVEYYGHKEEGGRISLYMEYIQPGSLKKYISESKRGDHLEEGHRNVEEDREKQNSDDGGEERQTLRDLKPANLLVDSKNIVKLVDFGLAKLIEESKGMCSVPGTQLYAAPEVVGNQNYQRLHEVLATDIWSLGCVIIEMSSGSPPRWSTSDSHPHIPEELCQEGKDFLELCFKIEPAERPSAEELLENPFVKAQVEVVKNTGLYKD 455
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1151 455 SMART serkin_6 192 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1151 455 SUPERFAMILY Toll/Interleukin receptor TIR domain 50 120 IPR035897 -
Acco03g1151 455 Gene3D Transferase(Phosphotransferase) domain 1 189 295 - -
Acco03g1151 455 SUPERFAMILY Protein kinase-like (PK-like) 190 443 IPR011009 -
Acco03g1151 455 Pfam TIR domain 61 120 IPR000157 GO:0007165
Acco03g1151 455 Gene3D Transferase(Phosphotransferase) domain 1 309 452 - -
Acco03g1151 455 Pfam Protein kinase domain 194 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1151 455 Pfam Protein kinase domain 315 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1151 455 ProSiteProfiles TIR domain profile. 58 209 IPR000157 GO:0007165
Acco03g1151 455 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 159 287 - -
Acco03g1151 455 Gene3D - 53 123 IPR035897 -
Acco03g1151 455 MobiDBLite consensus disorder prediction 283 314 - -
Acco03g1151 455 ProSiteProfiles Protein kinase domain profile. 192 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco03g1151 Acco-ChrAcco03 26119686 26128408 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1151 196 445 MAP Kinase Kinase Kinase AT5G66850 39.925 5.14e-47 170
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g1151 Pkinase 1.2e-27 CL0016