Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1132 ATGGTACATGAGCACCGGACACCTTTGATGGTTGCTGCTACTTGTGGCAGCGTTGGTGTCATCAAGTTGATTCTTTCATTATCATATGCAGATATTAATCGATCATGTGGGCTTGACAAAAGCATTGCTCTTCATTGTGCCACATCAGGTGGGGCTGTAAATGCTGTTGATGTGGTGAAGCTGCTATTGGTAGCTGGTACTGATCCAAATTCTATTGATGCCAATAGTCATTGTCCAGTTGATGTTATTGTGGTACCTCCCAAGCTTGAACATGTGAAAAGTATTCTTGAAGAACTTCTTCGAGAAAATTGTTCAATGACAAGGTGTGGTCTTAGGGTGGTTACAACTACCACAAATTCTAACTCTCCCCATCCATCAACTTTCCCAGGGAATGGGTCTCTTTCTTCATTAAAGTTTCATTTGAAGCTAAAGTTAAAGGAAGCTAATGCTTTATCTGCATCAGAGAAGAAAGAATATGTTGTTGATCCATCTCTTCCTGACATCAAAAGCAACATCTACTCAACTGATGAGTTCCAAATGTATTCTTTCAAGGTTCGACCATACTCACGCACCTATTCACATGATTGGACTGAATGTCTTTTTTCCACCCAGGAGATCTTTTTTGAAGCTGGTTATCTGTTTCTTGCTCTATGA 654 0.4021 MVHEHRTPLMVAATCGSVGVIKLILSLSYADINRSCGLDKSIALHCATSGGAVNAVDVVKLLLVAGTDPNSIDANSHCPVDVIVVPPKLEHVKSILEELLRENCSMTRCGLRVVTTTTNSNSPHPSTFPGNGSLSSLKFHLKLKLKEANALSASEKKEYVVDPSLPDIKSNIYSTDEFQMYSFKVRPYSRTYSHDWTECLFSTQEIFFEAGYLFLAL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1132 217 Gene3D - 2 122 IPR036770 -
Acco03g1132 217 PANTHER UNKEMPT FAMILY MEMBER 1 202 IPR045234 -
Acco03g1132 217 SUPERFAMILY Ankyrin repeat 4 98 IPR036770 -
Acco03g1132 217 ProSiteProfiles Ankyrin repeat profile. 39 74 IPR002110 GO:0005515
Acco03g1132 217 Pfam Ankyrin repeat 6 33 IPR002110 GO:0005515
Acco03g1132 217 SMART ANK_2a 39 71 IPR002110 GO:0005515
Acco03g1132 217 SMART ANK_2a 4 34 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1132 Acco-ChrAcco03 25718979 25719632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1132 1 202 C2H2 Transcription Factor Family AT5G12850 52.451 1.11e-58 194