Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1117 ATGCGCTTAAGGGAAAGATTTGGCACAGGAATAAAAAGTAAGGCAAATGCATCAATCGAAGTAGTCGAGCCTGAAACTCCTAGTAGAGAAAAAGAAAACAAAGTCTCACCAATATATAATATTCCACCAAACCCTACCCAAAGCCCTGTGTCCCATACAGATCATAATAACAAAGAAGAGGAAGAAGAAGCACGTCCATGCTCAGATGTCTCAGTACCGAGCTCGGAGGCTGAAAATGTGAAAACAAGTTCTACTTCCATGGCTGATATGAATGTAGAACCAGAGGCATTAGAGAATGATGAAGAAATAAAAGAGAAATGTAAAAAGGTTTATGATGAGATGGAAGAAGAAGAAGGAGGAGGAGGAAGTGAGGAAGAAGAGTATGGTGAGAGAGTTTATGAAGAGATAGAAGATGTAGAGATTAATTATGGTAGTGAAGCTAATAATTTTGATTGGATTAGTCAGATTTCTAAACCTAAGAGCTATTGGGAAGATCTCAGGCAGGCTTGGTACAAGGAGATGCTTGATGACAATGAATCACAAAAGGATGATATCTGCCAACTGCTTCAAAGAAGAACGGTGTCAAATTTTCTATGTAGTGATTTCCGAGATAAAATGGACGAGTTAATGGAGTCTCACAAGGGAACACAAGCAAACCTGTTGGCTAGTCAAGATGTCAATGAACCCAGACATCATGGGAAGATAGGGCATAAATTGGATGCAATTTTACAGCAACAAATGAATAATAATCCTTCAAAAAGGAATAAAGAAGAGGACGATATCAAAGCAGAAGCAGAAGAAGAAGAGAAACAAGAAGAGGAGGAGATTGTGATTAGTAGTTCATATAATGGAGAGAGTGACTCTATGAACCAGTCATCACCTTCACAACCTTCTCAGTCTCCATCTTTCTTTCTCCATACTCACCAAAACTCTTCGCCCAGCCGTCTTCCTTCAATTGAAATGGAGCTGATATATGACTTGAGAGGGCATATGAAGCAGCTGTTTCAAGAGATGTCTGAGTTAAGGAATTCAATAAGGACCTGCATTGATATGCAGATCATCTTACAAAAATCACTGAATCAACAAAATTACTCAGCCAAGGGAAAGAAGTCCCGTGATAGAGTATTGAAGAAAGGAAACTGCCGTATCTGCTCAAACATGAAAGCTGATTCACTCTTCTACAGATGTGGCCATATGTGCACGTGTCTAAAATGTGCCAATGAGTTACAACAGAAGAATGGGATGTGTCCAATCTGTGAGGCTCCAATAGTTGATGTTGTTCGAGTTTATGTTGATGTTTAG 1302 0.3932 MRLRERFGTGIKSKANASIEVVEPETPSREKENKVSPIYNIPPNPTQSPVSHTDHNNKEEEEEARPCSDVSVPSSEAENVKTSSTSMADMNVEPEALENDEEIKEKCKKVYDEMEEEEGGGGSEEEEYGERVYEEIEDVEINYGSEANNFDWISQISKPKSYWEDLRQAWYKEMLDDNESQKDDICQLLQRRTVSNFLCSDFRDKMDELMESHKGTQANLLASQDVNEPRHHGKIGHKLDAILQQQMNNNPSKRNKEEDDIKAEAEEEEKQEEEEIVISSSYNGESDSMNQSSPSQPSQSPSFFLHTHQNSSPSRLPSIEMELIYDLRGHMKQLFQEMSELRNSIRTCIDMQIILQKSLNQQNYSAKGKKSRDRVLKKGNCRICSNMKADSLFYRCGHMCTCLKCANELQQKNGMCPICEAPIVDVVRVYVDV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1117 433 Coils Coil 253 276 - -
Acco03g1117 433 Coils Coil 97 117 - -
Acco03g1117 433 SUPERFAMILY RING/U-box 380 426 - -
Acco03g1117 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 356 432 IPR013083 -
Acco03g1117 433 MobiDBLite consensus disorder prediction 72 90 - -
Acco03g1117 433 MobiDBLite consensus disorder prediction 53 67 - -
Acco03g1117 433 MobiDBLite consensus disorder prediction 277 314 - -
Acco03g1117 433 PANTHER BNAC05G24000D PROTEIN 56 432 - -
Acco03g1117 433 ProSiteProfiles Zinc finger RING-type profile. 381 420 IPR001841 -
Acco03g1117 433 MobiDBLite consensus disorder prediction 247 314 - -
Acco03g1117 433 Pfam Zinc finger, C3HC4 type (RING finger) 378 425 - -
Acco03g1117 433 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1117 Acco-ChrAcco03 25398893 25404475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1117 381 429 C3H Transcription Factor Family AT3G06140 36.735 8.87e-06 45.8