Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1079 ATGGCATATCGAGCACCATCATCTTCATCAATCACTTACAAGTGGACTTATGATGTGTTCCTCAGTTTTTATGGTGATGATACTCGCTTAGGTTTCATTAGTCATCTCTGTAAATCTCTTCATCAAAGTGGAATTCATGCGTTTATTGATGATGAATTCATTAGGACCGGAGAAAAGATCACACCTGCACTTTTCAGAGCTATAGAAGAATCAAGAATAGCCATCGTAGTCTTTTCAGAAAACTATGCGAACTCAACATTTTGTTTGGAAGAACTTGTAAAGATTCTCGAGTGCTTCAAGGAAGAAAGTCGGTTGATATATCCAGTATTTTACTATGTGGATCCATCAGAACTACGACGTCCAAGAAAAAAGTATGCAAAAGCACTGGCTCGACTGGAGGAAAGATTCAAAGACAACCAGCAAAAGGTGGAAAAATGGAGGCTGGCTCTGTCTCAAGCTGCTGATTTCAAAGGCTGTCATCTCAAACCCAAGATTGCAAAAGAACAAGAATGTATTACACGGATCACTAATGAAGTTGCTGCTAGGATTAACAAGGAGCCTTTATGTGTTACTAATTATCCAGTTGGACTTGTGTCTCGAGTGAAAGAAGTTATTTCTTGCTTAGATCTTTGGTCTACTAAAGAAATTATAATGATAGGAATTTGGGGAGCTGGTGGAATAGGTAAATCAACTATTGTAAGAGCTGTATATAATGCTATTGCTGATAATTTTGAAGCCTTATGTTTTCTTTCTAAAGTAAGAAAACAATCTAAACTGCCAAATGGTTTGTCACATCTTCAAGAGACATTATTGTGTAAATTAGCCATGGAGAAAGATCTCAAATTGGGTGATTATCATGAAGGAATACCAATAATAGAACATAGGCTTAATCAGAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAATTAGACCAATTAGAAGCTCTTGCTGGAAGTTGTAATTGGTTTGGTTGTGGAAGTAGAATCATCATCACCACCAGAAATAAGCAATTATTAGTAAGTCATGATGTTAAAAGCATTTATGAGGTCAAGGAATTAAATGACGAGGAATCTCTTAAGTTGCTTTGTTGGTATGCCTTCAAAAAAGAAACCGTAGATTCCAACTACATGGAAGTTTGCAATCGTGCAATACATTATTCGTGTGGCTTTCCATTAGCTTTAGAAGTGATTGGTTCTAATTTGCGTGGTAAAGGAGTCAATCACTGGAGTTCTGCATTGAATCAATTCAAAAGAATGCCGCATGAAAGAGTCTTGGATGCCTTGAAGTTAAGCTATGATACTTTGGGGGAAGTTGAGAAAAATGTTTTCCTTGACTTGGCTTGCTTTTTTAATGGTGAGAAATTAGCATATGTCAATGATGTGTTGCATTGTTTCCGTGGAATTCAACTAGAATATGCTATTGAAATGCTGATTGATAAATCCCTTGTAAAGATTGAACGAGATCATGTAACAATGCATGACTTGATAGAAGATGTTGGTAAAGAGTTTGTTCGACAAGAATCATCATATGAGCCTGGTGAACGTAGCAGATTGTGGTTCTATCAAGACATTCTTCATGTCTTGGAGCAAGACACGGGAACTAATAAAGTTGAAGCCATAATTCTAGACTTGCCTGAAAGTATAGAAGTACAATGGAGTGGAGAGGAATTCATGAAGATGAAAAATCTCAAGATGCTTGTGATAAGAAAAGCATGCTTTTCTGAATGTCCCAAATATCTCCCAAATAGTTTAAGGTGGTTGGAATGGGAAGGGTATCCTTTCAAATTTTTACCATATATGCGCCCAACTGAACTTGTCTATCTTGACTTGTCTTATAGTTATTGTGAATTGCTCCAACCGTTTGATAAGAAGTTTCACAATTTAAGGTGTATGAAGCTAAGCAATTGTAAATTTCTGCAGCAAATACCAGACTTATCTGGAGCTTCTAATTTAAAAGAATTGTGCCTTGATGATTGCACAAATTTAATTGAAATTCATGATTCAGTTGGGTGTTTAAAAAAGTTGAGAGAATTGAGTGCCATGCGATGCAAAAACTTGAAGATTTTGCCATCTTGCCTTAGCTTGACATCCCTTGAACATCTCAAACTCTTCAATTGTTCAAGTCTTCAGAGATTTCCAGACATATCAGTCATGATGGAAGAAATAAAGACACTTGATTTAGACAAGACAGCAATTACTGAATTACCACCTTCAATTTGCAAACTTATTGGACTTGAAATCTTAAGCATGGAGGAATGTCCTAATCTTAAGCAGCTACCAGCTAGCATTTGTTCATTACCAAAGCTTTGGAAGCTAACAGCAAATTTTTGTGAAGGAATGAGTCATTTTAAGATGTGTGAAGATGGAGAAGGAGCAAGCTTAGATTGCTCGGTTATGTCATTGAAAATGGAACATCTTTGTTTCTCAAATTGCAATTTATCAAATGACTCTCTTGCTTTCTGTCTTTCTCGCTTCACTGATATGATATATTTAGATTTAAGTTTTAATAATTTCACAATTCTTCCAGAATGTATCAAAGAATACCACAATTTGAGATATCTTTTGTTGGATAATTGCAACCAACTTAAGCATATTGGAGGGATGCCACCAAACTTGGAAAAATGTAGTGCCATATGTTGCACTTCATTGACAAAGTTATCCAGAGGCAAAGTATTGAATCAGGCATTAAACTTTCAACATGGGAAAAGAAACTTTATTTTGCCTGGGACAGAATTTCCAGAAAGGCTCCACAATTATAGTCGGGGAAGTTTTGTGTCATTTTGGGTTCGAAATGTGTTCCCGACGACTTTTCTATGGATTCTTGTTAAAGACGAACAAGATTATGTCTATAATTGTAAATTCTCGGTGCACATCAACAACACCAAGCTGGATATTTCTTCTAAGTGGCTTCAACTGTCAACAATAAAGACTAATCACATATATATAAGTGATATGCAAAGCATAATTCACAGTACGGAACTCCCCCTTCGAAATAAGTGGAACCAAGTGAAGGTTTCCATTGAGAGCAAAACACAGGAAATGAAAGACGAAAAAGAAATTTATTTTGGAATTCATGTATATAATCTACAAGGAAACTTAGGAAATATTCCATTCTTCGACCCTGGAAGATATGTTGGTCACAACTTGTTGCAAAACAAACAAGACCAACAAGATTGGGATGAACTCGAGGAAGTTATGAATTTGGATTCAAACTCAACAAAATATGCAGAGTCGATTGAGAACCCCAAGCATTATCAAGATCGACGACAAGATAGGAAAGAGCTTGAAGGTGATATGGATCAAGTTTCAGATTTAGTGAAATGTACAGAGTCACCAAATATCACGAGTGATCAAGAAGTTGCATCTGATTCAGTTGGTCAACTTGTTCACTTGTGTTATTTGGATTTGTCTGAGACAATGATTGTAAGTTTGCCTGATTCATTGTGAAGTCATTCCTACCACAACTTGATCGATCTGTGCCTGACTTGTTGCAAAAACTGTTGGAGAATTCCTTCCCTTGGGCAACTTCCTGCTCTGAGGTCCTTAATTATTGAAAGATTTCAAAGTGTGGTGGCTGTTGGTTCTGAGTTTTTCAAGGAACATGATTGTGCTTCAGTTATACCATTTCCATCCCTTGAAACTCTTCACTTTGGTGGTATGTTCTCCTGTGAAGAATGGCATTCAATTGATATGGAAGCTTTTCCTAAACTTCGTAAACTTCGCTTTTATGGTTGTCCCAGATTAATCGGAAACTTACCTGGCCAACTTGTTTCTTTGGAGTGTCTGGAAATTATAGCATGTCCACTTCTTGCTTCTTCTATCCCAAAGTGTCCGAAAATTCATGAGTTACTTCTATTTAAAAGTCAAAATGTAGTGTTGCAAGAGCAAGAATTACCACCTTCCCTACACCATCTACAAATTTCAGGTGCGCAGATGCTGGAGTCTCTGACTGAAAAGTTGCATATTGAATATTTATATGTACGGGATTGCTCTAATGCGACGCCACTTCCAGTGATTCATATGCCGCTATCAGTAAAAAAGCTACGTATAACAGATTGTGAAAATCTCAAGTTTGTCTTGGTTTCAAAGGCACCTCTTGTTCATCTCCGAAGTATTTCCATTTATAATTGCAAATTTCTGACGTCCTTGTTTGATGACATGGAACATCTTCTCCCAAATTTAGAGGAGCTAAGCATAGAAAGATGTCCAGAAATGGAGCCATTCTCACCAGGGTTGTTACCATCCAGTTTAAAACAGCTTGAGATAAGATATTGTGACAAGTTGTTATGTCAAACAGAATGGCATCACCTTTCAAGTATCACTAAGCTTCTCATCTCTACTCGATCTGAGACATTGAATTGCAGAGGGTTTCAACATCTAACATCTCTTCGAGAACTTAAAATTTTGGATTCTCCCAAGCTTGAGAAGATAAAAGGAGGAATGATGCCTCCTTCTCTACAAAGGCTACTCATTTGGGGTTGCTGGCTTCTTATAGAACGATGTCGCAACAAGGATGAGGAAATTTGGCCCATAATCTCCCACGTTCCATACATCATTTTGCATGCATGCTGA 4575 0.3701 MAYRAPSSSSITYKWTYDVFLSFYGDDTRLGFISHLCKSLHQSGIHAFIDDEFIRTGEKITPALFRAIEESRIAIVVFSENYANSTFCLEELVKILECFKEESRLIYPVFYYVDPSELRRPRKKYAKALARLEERFKDNQQKVEKWRLALSQAADFKGCHLKPKIAKEQECITRITNEVAARINKEPLCVTNYPVGLVSRVKEVISCLDLWSTKEIIMIGIWGAGGIGKSTIVRAVYNAIADNFEALCFLSKVRKQSKLPNGLSHLQETLLCKLAMEKDLKLGDYHEGIPIIEHRLNQKKILLILDDVDKLDQLEALAGSCNWFGCGSRIIITTRNKQLLVSHDVKSIYEVKELNDEESLKLLCWYAFKKETVDSNYMEVCNRAIHYSCGFPLALEVIGSNLRGKGVNHWSSALNQFKRMPHERVLDALKLSYDTLGEVEKNVFLDLACFFNGEKLAYVNDVLHCFRGIQLEYAIEMLIDKSLVKIERDHVTMHDLIEDVGKEFVRQESSYEPGERSRLWFYQDILHVLEQDTGTNKVEAIILDLPESIEVQWSGEEFMKMKNLKMLVIRKACFSECPKYLPNSLRWLEWEGYPFKFLPYMRPTELVYLDLSYSYCELLQPFDKKFHNLRCMKLSNCKFLQQIPDLSGASNLKELCLDDCTNLIEIHDSVGCLKKLRELSAMRCKNLKILPSCLSLTSLEHLKLFNCSSLQRFPDISVMMEEIKTLDLDKTAITELPPSICKLIGLEILSMEECPNLKQLPASICSLPKLWKLTANFCEGMSHFKMCEDGEGASLDCSVMSLKMEHLCFSNCNLSNDSLAFCLSRFTDMIYLDLSFNNFTILPECIKEYHNLRYLLLDNCNQLKHIGGMPPNLEKCSAICCTSLTKLSRGKVLNQALNFQHGKRNFILPGTEFPERLHNYSRGSFVSFWVRNVFPTTFLWILVKDEQDYVYNCKFSVHINNTKLDISSKWLQLSTIKTNHIYISDMQSIIHSTELPLRNKWNQVKVSIESKTQEMKDEKEIYFGIHVYNLQGNLGNIPFFDPGRYVGHNLLQNKQDQQDWDELEEVMNLDSNSTKYAESIENPKHYQDRRQDRKELEGDMDQVSDLVKCTESPNITSDQEVASDSVGQLVHLCYLDLSETMIVSLPDSLXSHSYHNLIDLCLTCCKNCWRIPSLGQLPALRSLIIERFQSVVAVGSEFFKEHDCASVIPFPSLETLHFGGMFSCEEWHSIDMEAFPKLRKLRFYGCPRLIGNLPGQLVSLECLEIIACPLLASSIPKCPKIHELLLFKSQNVVLQEQELPPSLHHLQISGAQMLESLTEKLHIEYLYVRDCSNATPLPVIHMPLSVKKLRITDCENLKFVLVSKAPLVHLRSISIYNCKFLTSLFDDMEHLLPNLEELSIERCPEMEPFSPGLLPSSLKQLEIRYCDKLLCQTEWHHLSSITKLLISTRSETLNCRGFQHLTSLRELKILDSPKLEKIKGGMMPPSLQRLLIWGCWLLIERCRNKDEEIWPIISHVPYIILHAC 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1079 1524 SUPERFAMILY "Winged helix" DNA-binding domain 424 530 IPR036390 -
Acco03g1079 1524 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Acco03g1079 1524 Gene3D - 13 184 IPR035897 -
Acco03g1079 1524 Gene3D - 185 348 IPR027417 -
Acco03g1079 1524 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Acco03g1079 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 447 IPR027417 -
Acco03g1079 1524 Gene3D Ribonuclease Inhibitor 1057 1364 IPR032675 -
Acco03g1079 1524 Pfam NB-ARC domain 201 426 IPR002182 GO:0043531
Acco03g1079 1524 Pfam TIR domain 17 180 IPR000157 GO:0007165
Acco03g1079 1524 Gene3D Ribonuclease Inhibitor 541 719 IPR032675 -
Acco03g1079 1524 Gene3D Ribonuclease Inhibitor 1365 1506 IPR032675 -
Acco03g1079 1524 Gene3D Ribonuclease Inhibitor 720 897 IPR032675 -
Acco03g1079 1524 Gene3D - 353 437 IPR042197 -
Acco03g1079 1524 SMART till_3 16 156 IPR000157 GO:0007165
Acco03g1079 1524 PRINTS Disease resistance protein signature 218 233 - -
Acco03g1079 1524 PRINTS Disease resistance protein signature 295 309 - -
Acco03g1079 1524 PRINTS Disease resistance protein signature 694 710 - -
Acco03g1079 1524 PRINTS Disease resistance protein signature 388 402 - -
Acco03g1079 1524 Coils Coil 122 149 - -
Acco03g1079 1524 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Acco03g1079 1524 SUPERFAMILY L domain-like 805 1495 - -
Acco03g1079 1524 SUPERFAMILY L domain-like 540 894 - -
Acco03g1079 1524 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 803 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1079 Acco-ChrAcco03 24551126 24558169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1079 17 784 WRKY Transcription Factor Family AT4G12020 32.579 1.97e-81 295