Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1058 ATGGTTGTTCAAGTAGCATCATCATCATCACATGGCTTCACCAGCAAAACAAAGTTCAGAGATGACTTAGAGAAAGTGTGCAATTGGAGATCTGCTTTGTCTGAAGCTGCTAGCTTGTCAGAGGCTTGGCTTTTAAAAGATGGATATAACGAAGGTAGATTCATTGAAAGTATTGTTGAAGATGCATATGCTAGGCTACCTCCCAAACGCTTCCATAATGTTGATTACATTGTTGGGCTTGAGCCTTGCATAGAAGAAGTGATGTCACTTTTGGATGAAACTGATAATAGTGTTTGTATGTTGGGAATTCATGGAGCTGGTGGAATTGGCAAAACGACCCTTGCAAAAGCTATATATAATTTGATCTTCACCCATTATGAAGGTGCTTGTTTTTTGTTTGATGTTCAAGAAACTTCAAGGAAATATCATGGTGTTGTTCGTCTTCAACAAACGCTCCTATCAGAAATTCTTGAGGAAAAGAAGATGAAATTTGTCAGCGTACATGAAGGAATATCAAAAATAAAGCATAGGCTCTCTCACAAAAAGGTTTTGTTGATTCTTGATGATGTTGAAGAAGTTGAACAGTTGGAACAACTTGCAGGAGGGTGTCACTGGTTTGGTTGCGGCAGCAAGATCATTATTACAACTAGAAACAAGGAATTGTTATTTGCATGCAATATTAAAAAGACATATGAAATGAAGGGGCTAGATGAGCATTACTCTCTTGAACTCTTTTGTTGGCATGCCTTTCATATGAGCCAACCTCCAAAAGGATACAGAAGTATGTCCATCGGTGTTACACGCTATGTACGTGGCCTTCCTTTGGGTTTAAAATTGATAGGCTCCAATTTGGCACGTAGAAACGTAGATGAATGGAGATATACATTGAAACAATATAATAAAATCTCAGGAGAACCAATTCATGAGATACTGAAAATAAGCTATGATTGCTTACCTGACGACGCTAAACCTATTTTCTTGGACATTTCTTGCTTCTTCAAAAAGGAGAGATTGGAATTTGTTGAAGACATACTAGGAGCTTGTTACTCTGGAACGAGGTTTTATATTGAAGTTCTTGCTGACAAATCTCTGATAACTATTGCTGATAATGGTTGCTTGCTAATGCATGATCTAATACAAGAAATGGGTAAAGAGATAGTCAGGCAAGAGGCACCCTTAAATCCTGGTAAACGTAGCAGGTTGTGGTATTATAAAGATGTGCTTAATGTGCTGCATAAAAATTTAGGAGAAGATGGTATTGAAGGAATAATACTTGATCCACCTCAACTAGAAGAAGTGAGGTGGAATGGTTTAGCTTTTGAGAAGATGAATAATCTTCGGATTCTCATTGTTAGAAATACCCTATTTTTAACAAGTCCTAAGTATCTTCCTAATAGTCTGAGATTGCTTGATTGGGAGGGATATCCTTCTAATACTTTACCACAAGATTTTTCTCCACCACAACTAGTTTGCTTCAAGTTATATGGAAGTCTTTTCAAATTGGAAGAGCCATTCCAGTGTGAATTCATAAGAGAAGTACCTGATATGTCTCATTTAAAAAATTTAAAAACATTAAACTTTCGCGAGTGTCGCAATCTGATTAAAGTTCATGATTCGGTGGGATCTCTTTGTAAGCTAATCCGATTAGATGTTAGTGAATGCACCAAACTTACAAGCTTTCCTAGTGAGATCAAGATGGAATCTCTTGAAGTGATTGATCTCAGTAACTGCAAGAGTCTCGACTACTTCCCACATATATTTGGAAAGATGGATGCACTTACAACTCTTTATGCAGAAGGCACTGCTATTAAAGAGCTCCCACCTTCTATCGGGAATCTTTCAGGGCTTGAAGATTTGAATATAAGCTCCTGCAAAAGCCTTACGAAGCTTCCCAATAGCTTATTGACATTGCAAAATCTAAACACACTTGTGTTGGAAGGCAGTCAATCTCGTGGCAGAACACCGTTGAAGAAATTAATGCAAGAGAGCCAACAAGTTACTAGTTGCACAAATTTAGAGTACTTGGATCTCGGAAACTGTGGCCTTTCGGATGAAGATGTTTGCCTTATAATGAAATGTTTTCAGAATGTTCAAGAGTTGATTCTGTCACGGAATAATTTTGTGTCGCTTCCTGAGTGCATTAAAGAGTGTGCTAATATGAGGAAACTAGATGTGGTTAACTGCAAGTGGCTAAGAGATATACCAGAGCTGCCTTCAGGGTTGCTGGAAATAAGGGCTGAGAATTGCACATCATTAACAACTGAGTCGTCAGGCCGTTTATGGTCTCAGGTATTTCTCATGCCTTTGTTAATTTTCATTTGTCATATTGGAGGTATGAACTTGTAG 2346 0.3794 MVVQVASSSSHGFTSKTKFRDDLEKVCNWRSALSEAASLSEAWLLKDGYNEGRFIESIVEDAYARLPPKRFHNVDYIVGLEPCIEEVMSLLDETDNSVCMLGIHGAGGIGKTTLAKAIYNLIFTHYEGACFLFDVQETSRKYHGVVRLQQTLLSEILEEKKMKFVSVHEGISKIKHRLSHKKVLLILDDVEEVEQLEQLAGGCHWFGCGSKIIITTRNKELLFACNIKKTYEMKGLDEHYSLELFCWHAFHMSQPPKGYRSMSIGVTRYVRGLPLGLKLIGSNLARRNVDEWRYTLKQYNKISGEPIHEILKISYDCLPDDAKPIFLDISCFFKKERLEFVEDILGACYSGTRFYIEVLADKSLITIADNGCLLMHDLIQEMGKEIVRQEAPLNPGKRSRLWYYKDVLNVLHKNLGEDGIEGIILDPPQLEEVRWNGLAFEKMNNLRILIVRNTLFLTSPKYLPNSLRLLDWEGYPSNTLPQDFSPPQLVCFKLYGSLFKLEEPFQCEFIREVPDMSHLKNLKTLNFRECRNLIKVHDSVGSLCKLIRLDVSECTKLTSFPSEIKMESLEVIDLSNCKSLDYFPHIFGKMDALTTLYAEGTAIKELPPSIGNLSGLEDLNISSCKSLTKLPNSLLTLQNLNTLVLEGSQSRGRTPLKKLMQESQQVTSCTNLEYLDLGNCGLSDEDVCLIMKCFQNVQELILSRNNFVSLPECIKECANMRKLDVVNCKWLRDIPELPSGLLEIRAENCTSLTTESSGRLWSQVFLMPLLIFICHIGGMNL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1058 781 SUPERFAMILY L domain-like 389 763 - -
Acco03g1058 781 PRINTS Disease resistance protein signature 100 115 - -
Acco03g1058 781 PRINTS Disease resistance protein signature 564 580 - -
Acco03g1058 781 PRINTS Disease resistance protein signature 177 191 - -
Acco03g1058 781 PRINTS Disease resistance protein signature 270 284 - -
Acco03g1058 781 SMART LRR_CC_2 613 640 IPR006553 -
Acco03g1058 781 SMART LRR_CC_2 519 546 IPR006553 -
Acco03g1058 781 SMART LRR_CC_2 669 693 IPR006553 -
Acco03g1058 781 Pfam NB-ARC domain 84 310 IPR002182 GO:0043531
Acco03g1058 781 Gene3D - 66 230 IPR027417 -
Acco03g1058 781 Gene3D Ribonuclease Inhibitor 588 763 IPR032675 -
Acco03g1058 781 Gene3D Ribonuclease Inhibitor 435 587 IPR032675 -
Acco03g1058 781 Gene3D - 235 319 IPR042197 -
Acco03g1058 781 SUPERFAMILY "Winged helix" DNA-binding domain 307 411 IPR036390 -
Acco03g1058 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 329 IPR027417 -
Acco03g1058 781 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 634 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1058 Acco-ChrAcco03 23830625 23834496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1058 29 677 WRKY Transcription Factor Family AT4G12020 33.873 9.05e-85 293