Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1056 ATGTTGACCTGCTTGTTCTCTTCCTTGGGACTTCTTGAAAAATCATTGGGCAAGCACTCCGAGCGGGGAACTCTAGGTTATGCAGCCCCAGAGGTTTTGTACAAAAAAAATTATCACAGCTCACATGAAGCTCTTGCTGCTGAAATTTGGAGTTTGGGCTGTGTAATTATTGAAATGTTCTCAGGGCGTGAACCTTGGTGGCCTGATTCTGATTCTGATTTTGAGCAACCTCCGTGCATACCAGAAGAGTTATGTCCAGAGGGTAAAGATTTTCTCTCACTCTGCTTCAAAAGAGAACCAGCCAAGCGACCATCTGCTAGACAATTACTAGAGCACCCGTTTGTAAAAGCACAAGCTGACGCGCTAAAGGAAATAAGTACAAGGATTGATGGTGTTGAGACTTGCTAA 408 0.4412 MLTCLFSSLGLLEKSLGKHSERGTLGYAAPEVLYKKNYHSSHEALAAEIWSLGCVIIEMFSGREPWWPDSDSDFEQPPCIPEELCPEGKDFLSLCFKREPAKRPSARQLLEHPFVKAQADALKEISTRIDGVETC 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1056 135 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 18 121 - -
Acco03g1056 135 Gene3D Transferase(Phosphotransferase) domain 1 6 131 - -
Acco03g1056 135 SMART serkin_6 2 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1056 135 Pfam Protein kinase domain 17 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1056 135 SUPERFAMILY Protein kinase-like (PK-like) 18 119 IPR011009 -
Acco03g1056 135 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1056 Acco-ChrAcco03 23710805 23712987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1056 20 116 MAP Kinase Kinase Kinase AT5G66850 46.789 1.81e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g1056 Pkinase 4.9e-17 CL0016