Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1053 ATGGAATACATCCAACCTGGTTCATTGAAGAAATATATCTCAGAATCAGAAGGAGGTAAATTGGATGAACCTTTAGTTCAAAATTTCACTGCACAAATTCTCTTTGGGCTGGTTCACCTGCATAGCAACAGACAAGTTCACAGGGACTTGAAGCCAGCCAATCTACTTGTTGATTCTAAGGTCATTGTAAAGCTGGTTGACTTTGGTTTGGCTAAATTGTTAGCAGAATCTTTGGGCAAACACTCTGAAATGGGAGCTCTACGTTATGCAGCCCCAGAGGTTCTTCATAAACAAAATTATCAGACCTCGCATGAAGCTTTAGTTTCTGATATATGGAGTTTGGCTTGTGTAGTCATTGAAATGTTCTCAGGGTGTTCACGTGATTCTGATTGTGATTTGCATCAGCAAATACCAGAAGAGCTATGCGAGGAGGGTAAAAATTTTCTCAAACTCTGCTTCAAAAGAAAACCAGCCGAACGACCATCTGCTAAAGAATTACTAAAGCACCCATTTGTAAAAGCACAAGCTGACGCACTGATGGAAGGAAGTACAAGGATTGATGGTGTTTGA 570 0.4035 MEYIQPGSLKKYISESEGGKLDEPLVQNFTAQILFGLVHLHSNRQVHRDLKPANLLVDSKVIVKLVDFGLAKLLAESLGKHSEMGALRYAAPEVLHKQNYQTSHEALVSDIWSLACVVIEMFSGCSRDSDCDLHQQIPEELCEEGKNFLKLCFKRKPAERPSAKELLKHPFVKAQADALMEGSTRIDGV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1053 189 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 177 - -
Acco03g1053 189 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1053 189 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1053 189 Pfam Protein kinase domain 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1053 189 SUPERFAMILY Protein kinase-like (PK-like) 1 176 IPR011009 -
Acco03g1053 189 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1053 Acco-ChrAcco03 23621717 23627395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1053 1 173 MAP Kinase Kinase Kinase AT5G66850 44.211 6.84e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g1053 Pkinase 1.1e-38 CL0016