Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1043 ATGATCCCCTCTGCTTCCCCAAGAGGCTGTGTGTGTTTTGGAGGAAGCTCTACAATCATCACTAGGGCTTTCACTTGCTCATTGAGTCTCCCTTTCAGCTTTTTCGTCATAGCAACTATCTCTTGTGATCTTTACTCTCCTTCTTCGCCTTCTCTGCCATTTTTACTCCAGGCAAGCCATTTCAACTTCCTGCTCCATTCTGCAAAGGATTTGTTTAGTTTCTCGAAATTCTTAGGGGCTTTCCATAGTATCCTTAGAAGGCGTCGGCAGTTGGAAAAGAAGGTGATCATTGGAAGACGATTTATTTTTGAAAGAGTGTTCTACACGAATATGGACTTGCATGCTCGAATCTTTGTCATCTCGATGATAGCTTTTACAGGAATCTTTTGTACTGGAGATACTGACTTGCTTGACGTGGCAGCAATCAATAGTTTATATGTTGCTCTGGGCTCGCCGCCTATTCAAGGTTGGAAAACCACTGGGGGAGATCCATGTGAGGAACTGTGGCAAGGCGTGTCTTGTGTCTTCTCCAACATAACTCAATTGAGTCTCAGAGGCATGAATTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTTCCTTCCATCATTGAAATAGATCTTAGCAACAACCACATCAGAGGGCCTATTCCATCTGCGCTACCCCCTACTCTAAGGATCTTGTCTCTTTCAAGTAATCAGTTAAATGGAAGTATTCCAGAAACCCTATCCTCTCTAACACAATTGTCAGATTTGTCATTAAGTAATAACCTTTTGGATGGACAAATCCCTAATGTGTTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCAGCTAACAACTTGAGTGGTCAGCTACCCCTTTCAATGGGAAATTTATCATTACTTTCGACATTACACATGCAGAACAATGAACTTTCCGGGTTTCTTAATGTTTTGCAAGATCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCTCAATTGTTGAGCATCCCAAATCTCAGGAAAGATGGAAATCCATTTAATACGACTGTCATCCCATCACCTCCTGCTGCAGCCCCAGCTCCTGTAGCCATGGCCCCATCACCTGCCAAAGCCACTTGGAATGTGGCAAATAATCCATTTACCTTGGTTGCACCAATACCTGCAAGTTCTAGGAAGTCTTTTATATCTAAGAATGTTATTTGGTTAGCCATTGCTGGGTTTTTGGTGTTGATTGCCCTAGGAGTTTGTCTTTTTATGTTGTGGTGTTTAAAGAGAAGGCCAGAAAAGAAAAATGCTAAGACAATGGATATGGGTTTGGACGCAATGTCATTACATAAACATCAATGCAGTGACTCTTTGGAGAAAGCATCTGGGAAATCAATAAGATCTCTTGGATATGGAGAACCAAATAGAAGAGCAAATATGATTCCAAATGTTCAGGATGAACAGGAAATACGTGTGAAGAGAGTATCAGCAGGTTCCAAATTTGCAACATTGCAGGCTCTTCCAATCAATCTTGGTGAAAAGGACTTCACCAAAACAGCCATACCTACCGAAGTTACCGAAAGACAAGAAGTGACATGTTCCTTGCAAGTTTATACTATCGCATCACTTCAGCAGTATACAAATAGTTTTTCTCAAGAAAATCATATTGGTGAAGGCACACTAGGTGTCCTTTATCGGGCTGAGCTCCCTGATGGAAAGCAACTGGCAGTGTGGAAACTGAATGCTGTTGCTTCTATAGGACAAGAACAGTTTCTTCAATTTGTGGCCAGTATTTCCAAAATTCAACATGCTAATATTGTGAAGTTTATGGGCTACTGTGCTGAGAATGGTCAGCAACTTCTTGTATATGATTATTTCAGCAACAAAACTCTTCATGATGCACTGCATGAAGATAATGAACTCCATGCAAAACTGTCATGGAATGCACGAATACGGGTGGCACTTGGAGCTGCTAGAGCTTTAGAGTATCTGCATGAAAACTTCCAGCCACCTTTTGTGCATCAAAATTTAAAATCAGCTAATGTTCTCTTGAATACTGAGCTTGAAGTATGTGTCTCTGACTGTGGATTTGATCCTTTACTGTCTTCTGGATCTGCTGGACAGTTGTCAGGATGCCTCCTCACTGCAAATGGTTATGGTGCGCCAGAACTTGAGTCAGGGAGTTATACAAAGCAGAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACCGGTCACGACCTCGTGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTGCATGACATTGATGCTTTGACAAAAATGGTTGACCCCTCCTTAAAAGGAGCTTATTCTATGAAGTCCTTGTCACGTTTTGCAGACATCATTTTTTCATGTCTACAGCGTGAACCAGAGTTCCGACCAGCAATGGCGGAAGTTGTGCAGGATCTCCTACGAATGATCTAG 2475 0.4194 MIPSASPRGCVCFGGSSTIITRAFTCSLSLPFSFFVIATISCDLYSPSSPSLPFLLQASHFNFLLHSAKDLFSFSKFLGAFHSILRRRRQLEKKVIIGRRFIFERVFYTNMDLHARIFVISMIAFTGIFCTGDTDLLDVAAINSLYVALGSPPIQGWKTTGGDPCEELWQGVSCVFSNITQLSLRGMNLGGELGSNLNFPSIIEIDLSNNHIRGPIPSALPPTLRILSLSSNQLNGSIPETLSSLTQLSDLSLSNNLLDGQIPNVFQQLTGLINIDLSANNLSGQLPLSMGNLSLLSTLHMQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTVIPSPPAAAPAPVAMAPSPAKATWNVANNPFTLVAPIPASSRKSFISKNVIWLAIAGFLVLIALGVCLFMLWCLKRRPEKKNAKTMDMGLDAMSLHKHQCSDSLEKASGKSIRSLGYGEPNRRANMIPNVQDEQEIRVKRVSAGSKFATLQALPINLGEKDFTKTAIPTEVTERQEVTCSLQVYTIASLQQYTNSFSQENHIGEGTLGVLYRAELPDGKQLAVWKLNAVASIGQEQFLQFVASISKIQHANIVKFMGYCAENGQQLLVYDYFSNKTLHDALHEDNELHAKLSWNARIRVALGAARALEYLHENFQPPFVHQNLKSANVLLNTELEVCVSDCGFDPLLSSGSAGQLSGCLLTANGYGAPELESGSYTKQSDVFSFGVVMLELLTGRKSCDRSRPRGEQFLVRWAVPQLHDIDALTKMVDPSLKGAYSMKSLSRFADIIFSCLQREPEFRPAMAEVVQDLLRMI 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1043 824 Gene3D Ribonuclease Inhibitor 139 388 IPR032675 -
Acco03g1043 824 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 135 360 - -
Acco03g1043 824 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 624 824 - -
Acco03g1043 824 SUPERFAMILY Protein kinase-like (PK-like) 528 820 IPR011009 -
Acco03g1043 824 Pfam Leucine rich repeat 222 282 IPR001611 GO:0005515
Acco03g1043 824 Pfam Protein tyrosine and serine/threonine kinase 550 820 IPR001245 GO:0004672|GO:0006468
Acco03g1043 824 Gene3D Phosphorylase Kinase; domain 1 510 623 - -
Acco03g1043 824 ProSiteProfiles Protein kinase domain profile. 548 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1043 824 Gene3D Transferase(Phosphotransferase) domain 1 624 823 - -
Acco03g1043 824 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 177 820 - -
Acco03g1043 824 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 513 623 - -
Acco03g1043 824 SUPERFAMILY L domain-like 138 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1043 Acco-ChrAcco03 23211563 23220386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1043 138 824 Strubbelig Receptor Gene Family AT4G03390 50.599 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Acco03g1043 PK_Tyr_Ser-Thr 2.2e-34 CL0016