Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1031 ATGAGTGGCAACCGATGGCTTGCAATTCGTCTGGAAACTTTGGGTGGCATTATGATATGGTTTACTGCATCTTTTGCTGTATTGCAAAATGGGAGGGCTGAGAACCAGCAGGCATTTGCATCCACGATGGGGCTTCTACTTAGTTATGCTTTAAATATTACTAGTCTGCTGACAGGGGTCCTCAGACTTGCAAGTCTGGCTGAGAATAGTTTAAACGCTGTTGAGCGTGTGGGTACTTATGTTGATTTGCCTTCGGAGGCTCCATCTATCATTGAGAGTAACCGTCCTCCTCCTGGGTGGCCATCATCTGGATCAATCAGATTTGAAGATGCTGTTCTTCGCTATAGGCCTGAACTTCCACCTGTCTTACATGGGCTGTCTTTCACAATTTTCCCAAGTGACAAGGTTGGCGTTGTTGGTAGGACAGGAGCAGGAAAAAGTAGCATGTTTAATGCTTTATTTCGACTTGTAGAGCTAGAAAGAGGAAAAATCTTAATCGATGACTGTGACATTGCTAAGTTTGGACTGACTGATTTACGTAAAGTTCTTGGAATTATCCCACAGTCACCTGTTCTCTTTTTAGGAACTGTGAGATTTAATCTTGATCCTTTTAATGAGCACAATGATGCTGACCTTTGGGAGGCTTTGGAGAGAGCACATTTGAAGGATGTGATTCGAAGGAGTTCATTGGGACTGGAAGCAGAGATTCGTGAATATGGGACCCCTGAGGAGCTACTGTCAAACGACGGTGGTGCTTTCTCAAAGATGGTGCAAAGTACTGGAGCTGCAAATGCTCAATATCTACGCAGCTTAGTGCTCAATGGGGATGGTGGAAACAAGCCGGTGGAAGAGGGGAATCATCTCGATGGACAGCAGAAATGGTTAGCTTCATCTCGCTGGAAAGTTGCAGCGCAATTTGCCCTTGCCGTCAGCATGACCTCATCACAGAATGATCTTCGCCAACTGGAAATTGAAGATGACAACAGTATTCTGAAGACGGCCAAGGATGCCGTGATAACACTGCAGGGGATTTTGGATGGAAGGCACGATAAAGAAATTGAGGAATCCTTAGACCAACACCAGATATCACCAAACAGATGGTGGCCATCCTTTTTCAAGATGATTGAGGGTCTGGCTATGTTGAGCAGATTGGCCCGAAACAGGTTCCATGAATCTGACTACAATTTTGAAGACACCTCAATAGATTTCGACCATGTTGATATGTAA 1227 0.4474 MSGNRWLAIRLETLGGIMIWFTASFAVLQNGRAENQQAFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERVGTYVDLPSEAPSIIESNRPPPGWPSSGSIRFEDAVLRYRPELPPVLHGLSFTIFPSDKVGVVGRTGAGKSSMFNALFRLVELERGKILIDDCDIAKFGLTDLRKVLGIIPQSPVLFLGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRSSLGLEAEIREYGTPEELLSNDGGAFSKMVQSTGAANAQYLRSLVLNGDGGNKPVEEGNHLDGQQKWLASSRWKVAAQFALAVSMTSSQNDLRQLEIEDDNSILKTAKDAVITLQGILDGRHDKEIEESLDQHQISPNRWWPSFFKMIEGLAMLSRLARNRFHESDYNFEDTSIDFDHVDM 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1031 408 Gene3D - 89 257 IPR027417 -
Acco03g1031 408 Gene3D ABC transporter type 1, transmembrane domain 2 87 IPR036640 GO:0005524|GO:0016020
Acco03g1031 408 SUPERFAMILY ABC transporter transmembrane region 4 86 IPR036640 GO:0005524|GO:0016020
Acco03g1031 408 FunFam ATP-dependent bile acid permease, putative 91 243 - -
Acco03g1031 408 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 254 - -
Acco03g1031 408 Pfam ABC transporter 123 224 IPR003439 GO:0005524
Acco03g1031 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 241 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1031 Acco-ChrAcco03 22853048 22858358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1031 116 241 Calmodulin-binding Proteins AT2G36910 29.921 5.30e-10 59.7