Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1004 ATGTTTCCCGAACATGCAATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTATACTATTAGAGATTATAAGTGGAAGAAAAGGCTCAAGCTTTTATAACAATGAGCACTCTCTAAGCCTTTTAGGATTTGCATGGAAATTATGGAATGAAGAAAACATTGTACAGCTAATAGATCCTGAAATATTAGATCAAAACCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTATGTGTACAAGCCCTGGCGATTGAGAGGCCGAGTATGAGCACTGTAGTTTCTATGCTTAACAGTGAGATTGTCAATCTTCCTCCTCCGAGGCAACCTGCATTCATCCAATGGCAGAGTATATTGAATCAATTGAACCCACAAGAAACTGAAAGATTATTTTCCAGCAACGAAGTTAGTATTAGTGACATACAGGGCAGATAG 453 0.3797 MFPEHAMEGLFSEKSDVFSFGVILLEIISGRKGSSFYNNEHSLSLLGFAWKLWNEENIVQLIDPEILDQNLEKDILRCIHIGLLCVQALAIERPSMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLNPQETERLFSSNEVSISDIQGR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1004 150 Pfam Protein tyrosine and serine/threonine kinase 1 102 IPR001245 GO:0004672|GO:0006468
Acco03g1004 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 149 - -
Acco03g1004 150 SUPERFAMILY Protein kinase-like (PK-like) 3 138 IPR011009 -
Acco03g1004 150 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1004 Acco-ChrAcco03 21477376 21477960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1004 1 150 Receptor kinase-like Gene Family AT4G23140 47.742 3.01e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g1004 PK_Tyr_Ser-Thr 3.5e-07 CL0016